RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 NOA1Q8NC60 698 aaKnown RBP28.45■■■□□ 2.14
LDB1-202ENST00000425280 GOLPH3Q9H4A6 298 aa28.45■■■□□ 2.14
LDB1-202ENST00000425280 OSGEPQ9NPF4 335 aa28.45■■■□□ 2.14
LDB1-202ENST00000425280 PACSIN2Q9UNF0 486 aaPredicted RBP28.45■■■□□ 2.14
LDB1-202ENST00000425280 SMIM35A0A1B0GVV1 85 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 MEFVO15553 781 aaPredicted RBP28.44■■■□□ 2.14
LDB1-202ENST00000425280 ERLIN2O94905 339 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 TMEM191BP0C7N4 346 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 AKR1A1P14550 325 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 ADAM17P78536 824 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 TMEM62Q0P6H9 643 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 FSCN1Q16658 493 aaKnown RBP28.44■■■□□ 2.14
LDB1-202ENST00000425280 RUFY4Q6ZNE9 571 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 SLFN11Q7Z7L1 901 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 GABRQQ9UN88 632 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 GPR32O75388 356 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 CYP2C9P11712 490 aa28.44■■■□□ 2.14
LDB1-202ENST00000425280 CLSTN1O94985 981 aa28.43■■■□□ 2.14
LDB1-202ENST00000425280 FGFR4P22455 802 aa28.43■■■□□ 2.14
LDB1-202ENST00000425280 LACTBP83111 547 aaPredicted RBP28.43■■■□□ 2.14
LDB1-202ENST00000425280 ANKRD36BP1Q96IX9 119 aa28.43■■■□□ 2.14
LDB1-202ENST00000425280 RPGRIP1Q96KN7 1286 aa28.43■■■□□ 2.14
LDB1-202ENST00000425280 PCDHB4Q9Y5E5 795 aa28.43■■■□□ 2.14
LDB1-202ENST00000425280 PCDHB2Q9Y5E7 798 aa28.43■■■□□ 2.14
LDB1-202ENST00000425280 A0A1B0GUA9 196 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 LACTBL1A8MY62 500 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 ALDH1A1P00352 501 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 TNNC2P02585 160 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 BPIFB4P59827 614 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 CDC42EP1Q00587 391 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 MTERF4Q7Z6M4 381 aaKnown RBP28.42■■■□□ 2.14
LDB1-202ENST00000425280 CNTN6Q9UQ52 1028 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 POU5F1Q01860 360 aaKnown RBP28.42■■■□□ 2.14
LDB1-202ENST00000425280 TRPC3Q13507 836 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 SGSM1Q2NKQ1 1148 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 ZNF572Q7Z3I7 529 aaPredicted RBP28.42■■■□□ 2.14
LDB1-202ENST00000425280 TRIB2Q92519 343 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 GCOM2Q9BZD3 368 aaPredicted RBP28.42■■■□□ 2.14
LDB1-202ENST00000425280 ANKZF1Q9H8Y5 726 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 CDHR5Q9HBB8 845 aa28.42■■■□□ 2.14
LDB1-202ENST00000425280 DUSP11O75319 330 aaKnown RBP28.41■■■□□ 2.14
LDB1-202ENST00000425280 CYBAP13498 195 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 PURAQ00577 322 aaKnown RBP28.41■■■□□ 2.14
LDB1-202ENST00000425280 UBR7Q8N806 425 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 PARD6BQ9BYG5 372 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 COG5Q9UP83 839 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 GINS2Q9Y248 185 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 NFICP08651 508 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 DNA2P51530 1060 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 GPC5P78333 572 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 KYAT1Q16773 422 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 TMEM270Q6UE05 265 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 DAAM2Q86T65 1068 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 ZNF677Q86XU0 584 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 SYCE1Q8N0S2 351 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 KATNAL1Q9BW62 490 aa28.41■■■□□ 2.14
LDB1-202ENST00000425280 MYADML2A6NDP7 307 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 BUB1BO60566 1050 aaPredicted RBP28.4■■■□□ 2.14
LDB1-202ENST00000425280 KIF4AO95239 1232 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 FLT3LGP49771 235 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 ZNF200P98182 395 aaPredicted RBP28.4■■■□□ 2.14
LDB1-202ENST00000425280 TCEAL1Q15170 157 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 RPS6KA1Q15418 735 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 CLEC16AQ2KHT3 1053 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 MFSD14CQ5VZR4 134 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 RHOT2Q8IXI1 618 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 XYLT2Q9H1B5 865 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 STXBP5LQ9Y2K9 1186 aa28.4■■■□□ 2.14
LDB1-202ENST00000425280 TREHO43280 583 aa28.39■■■□□ 2.14
LDB1-202ENST00000425280 SLC10A6Q3KNW5 377 aa28.39■■■□□ 2.14
LDB1-202ENST00000425280 JADE1Q6IE81 842 aa28.39■■■□□ 2.14
LDB1-202ENST00000425280 RBBP8NLQ8NC74 664 aaPredicted RBP28.39■■■□□ 2.14
LDB1-202ENST00000425280 MSANTD4Q8NCY6 345 aa28.39■■■□□ 2.14
LDB1-202ENST00000425280 DNAJB3Q8WWF6 145 aa28.39■■■□□ 2.14
LDB1-202ENST00000425280 ADPGKQ9BRR6 497 aa28.39■■■□□ 2.14
LDB1-202ENST00000425280 NIF3L1Q9GZT8 377 aa28.39■■■□□ 2.14
LDB1-202ENST00000425280 SMARCAL1Q9NZC9 954 aa28.39■■■□□ 2.14
LDB1-202ENST00000425280 EHD2Q9NZN4 543 aa28.39■■■□□ 2.14
LDB1-202ENST00000425280 AOC2O75106 756 aa28.39■■■□□ 2.13
LDB1-202ENST00000425280 HADHBP55084 474 aaKnown RBP28.39■■■□□ 2.13
LDB1-202ENST00000425280 PTPROQ16827 1216 aa28.39■■■□□ 2.13
LDB1-202ENST00000425280 ACAD10Q6JQN1 1059 aa28.39■■■□□ 2.13
LDB1-202ENST00000425280 PEX26Q7Z412 305 aa28.39■■■□□ 2.13
LDB1-202ENST00000425280 OSMRQ99650 979 aa28.39■■■□□ 2.13
LDB1-202ENST00000425280 TRIP12Q14669 1992 aaPredicted RBP28.39■■■□□ 2.13
LDB1-202ENST00000425280 RHOXF2BP0C7M4 288 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 HOXA11P31270 313 aaPredicted RBP28.38■■■□□ 2.13
LDB1-202ENST00000425280 NOGQ13253 232 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 ZNF699Q32M78 642 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 NT5DC3Q86UY8 548 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 RHOXF2Q9BQY4 288 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 ASB7Q9H672 318 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 ABCB6Q9NP58 842 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 SIX4Q9UIU6 781 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 C6orf222P0C671 652 aaPredicted RBP28.38■■■□□ 2.13
LDB1-202ENST00000425280 CCDC181Q5TID7 509 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 MS4A14Q96JA4 679 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 CTTNBP2NLQ9P2B4 639 aa28.38■■■□□ 2.13
LDB1-202ENST00000425280 C17orf102A2RUQ5 167 aa28.37■■■□□ 2.13
LDB1-202ENST00000425280 DARSP14868 501 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms