RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 LIMCH1Q9UPQ0 1083 aa16.45■□□□□ 0.22
ATG4B-209ENST00000425239 CEP250Q9BV73 2442 aa16.45■□□□□ 0.22
ATG4B-209ENST00000425239 FAM170BA6NMN3 283 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 ATF2P15336 505 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 RFX1P22670 979 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 CCR2P41597 374 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 PEX3P56589 373 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 TMEM132AQ24JP5 1023 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 VARS2Q5ST30 1063 aaKnown RBP16.44■□□□□ 0.22
ATG4B-209ENST00000425239 HAUS3Q68CZ6 603 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 KCNK18Q7Z418 384 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 TCEAL8Q8IYN2 117 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 KCNG4Q8TDN1 519 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 ING5Q8WYH8 240 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 MCRS1Q96EZ8 462 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 RUSC1Q9BVN2 902 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 TARS2Q9BW92 718 aaKnown RBP16.44■□□□□ 0.22
ATG4B-209ENST00000425239 CNTN3Q9P232 1028 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 FBXO4Q9UKT5 387 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 MRPS23Q9Y3D9 190 aaKnown RBP16.44■□□□□ 0.22
ATG4B-209ENST00000425239 PCDHB6Q9Y5E3 794 aa16.44■□□□□ 0.22
ATG4B-209ENST00000425239 COL4A2P08572 1712 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 PP2D1A8MPX8 630 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 TRAPPC3O43617 180 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 MOSPD3O75425 235 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 MICAL2O94851 1124 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 CEBPBP17676 345 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 PTPN2P17706 415 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 TARSP26639 723 aaKnown RBP16.43■□□□□ 0.22
ATG4B-209ENST00000425239 CDC25AP30304 524 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 OSTNP61366 133 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 PFKPQ01813 784 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 PTGDRQ13258 359 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 RINT1Q6NUQ1 792 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 KIAA2013Q8IYS2 634 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 ZBTB44Q8NCP5 570 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 C18orf25Q96B23 403 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-209ENST00000425239 ELSPBP1Q96BH3 223 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 TCEAL4Q96EI5 215 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 ZBTB45Q96K62 511 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-209ENST00000425239 PHLPP2Q6ZVD8 1323 aa16.43■□□□□ 0.22
ATG4B-209ENST00000425239 PDCD11Q14690 1871 aaKnown RBP16.42■□□□□ 0.22
ATG4B-209ENST00000425239 CITO14578 2027 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 SFI1A8K8P3 1242 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 PODXLO00592 558 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 SYN3O14994 580 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 LILRB5O75023 590 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 HIP1RO75146 1068 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 MCF2P10911 925 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 SLC10A6Q3KNW5 377 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 ZC3H14Q6PJT7 736 aaKnown RBP16.42■□□□□ 0.22
ATG4B-209ENST00000425239 TMEM130Q8N3G9 435 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 RUBCNQ92622 972 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 BORCS6Q96GS4 357 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 ZSWIM3Q96MP5 696 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 BCO2Q9BYV7 579 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 HAPLN2Q9GZV7 340 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 DLL3Q9NYJ7 618 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 FBXL5Q9UKA1 691 aa16.42■□□□□ 0.22
ATG4B-209ENST00000425239 CCDC169A6NNP5 214 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 VNN2O95498 520 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 RPL9P32969 192 aaKnown RBP16.41■□□□□ 0.22
ATG4B-209ENST00000425239 RPS9P46781 194 aaKnown RBP16.41■□□□□ 0.22
ATG4B-209ENST00000425239 UBXN2BQ14CS0 331 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 ZNF568Q3ZCX4 644 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 FAM78AQ5JUQ0 283 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 ZBTB41Q5SVQ8 909 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 SNX29Q8TEQ0 813 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 SUSD3Q96L08 255 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 ACAP3Q96P50 834 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 NELL2Q99435 816 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 CCDC94Q9BW85 323 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-209ENST00000425239 MRPL4Q9BYD3 311 aaKnown RBP16.41■□□□□ 0.22
ATG4B-209ENST00000425239 C17orf75Q9HAS0 396 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 HEBP1Q9NRV9 189 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 TOPORSQ9NS56 1045 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-209ENST00000425239 SLC38A7Q9NVC3 462 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 CEP72Q9P209 647 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 DNM3Q9UQ16 869 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 RBM19Q9Y4C8 960 aaKnown RBP16.41■□□□□ 0.22
ATG4B-209ENST00000425239 F5P12259 2224 aa16.41■□□□□ 0.22
ATG4B-209ENST00000425239 MED19A0JLT2 244 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-209ENST00000425239 TDGF1P13385 188 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 TGM1P22735 817 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 MAGEA9P43362 315 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 YARSP54577 528 aaKnown RBP16.4■□□□□ 0.22
ATG4B-209ENST00000425239 EPHA5P54756 1037 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 ZBTB6Q15916 424 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 TPGS2Q68CL5 300 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 MPZL3Q6UWV2 235 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 MAMSTRQ6ZN01 415 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 TPRG1Q6ZUI0 275 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 MAP4K3Q8IVH8 894 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 ASB16Q96NS5 453 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 KMT5AQ9NQR1 393 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.4■□□□□ 0.22
ATG4B-209ENST00000425239 SPATA6Q9NWH7 488 aaPredicted RBP16.4■□□□□ 0.22
ATG4B-209ENST00000425239 INSL5Q9Y5Q6 135 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 NCANO14594 1321 aa16.4■□□□□ 0.22
ATG4B-209ENST00000425239 SLC16A4O15374 487 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms