RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 SPATA1Q5VX52 437 aa27.51■■■□□ 2
TSPAN3-203ENST00000424443 PDE12Q6L8Q7 609 aaKnown RBP27.51■■■□□ 2
TSPAN3-203ENST00000424443 TCF25Q9BQ70 676 aa27.51■■■□□ 2
TSPAN3-203ENST00000424443 F8W810 466 aa27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 CCNE1P24864 410 aa27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 LRRC63Q05C16 580 aa27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 CYP24A1Q07973 514 aa27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 ZCWPW2Q504Y3 356 aa27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 FUT10Q6P4F1 479 aa27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 PPP2R3CQ969Q6 453 aa27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 NGRNQ9NPE2 291 aaKnown RBP27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 NUB1Q9Y5A7 615 aa27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 SF3B1O75533 1304 aaKnown RBP eCLIP27.51■■□□□ 1.991e-6■■■■■ 66.8
TSPAN3-203ENST00000424443 ANK1P16157 1881 aa27.51■■□□□ 1.99
TSPAN3-203ENST00000424443 CETN3O15182 167 aa27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 TRAPPC3O43617 180 aa27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 TMEM191BP0C7N4 346 aa27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 DLATP10515 647 aaKnown RBP27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 CD44P16070 742 aaKnown RBP27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 ELAVL2Q12926 359 aaKnown RBP27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 CCDC183Q5T5S1 534 aa27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 EFCAB13Q8IY85 973 aa27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 CCDC127Q96BQ5 260 aa27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 ANKRD36BP1Q96IX9 119 aa27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 DPP3Q9NY33 737 aa27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 TRANK1O15050 2925 aa27.5■■□□□ 1.99
TSPAN3-203ENST00000424443 BICDL2A1A5D9 508 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 PPP1R3GB7ZBB8 358 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 TMEM189-UBE2V1I3L0A0 370 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 TNNI1P19237 187 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 LRPAP1P30533 357 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 GUCY2FP51841 1108 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 ERVFC1P60507 584 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 PSMD6Q15008 389 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 PLPP4Q5VZY2 271 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 ANKRD40Q6AI12 368 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 KIAA1841Q6NSI8 718 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 NELFBQ8WX92 580 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 SYAP1Q96A49 352 aaPredicted RBP27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 CTNND2Q9UQB3 1225 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 STXBP5LQ9Y2K9 1186 aa27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 R3HCC1Q9Y3T6 440 aaKnown RBP27.49■■□□□ 1.99
TSPAN3-203ENST00000424443 SOD2P04179 222 aa27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 PSMC2P35998 433 aaKnown RBP27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 CASP4P49662 377 aa27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 WNT7BP56706 349 aa27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 PAK1Q13153 545 aa27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 CAMK1Q14012 370 aa27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 SMC1AQ14683 1233 aaKnown RBP27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 USP37Q86T82 979 aa27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 MFSD14AQ96MC6 490 aa27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 NSUN3Q9H649 340 aaKnown RBP27.48■■□□□ 1.99
TSPAN3-203ENST00000424443 TNNC2P02585 160 aa27.47■■□□□ 1.99
TSPAN3-203ENST00000424443 IRS1P35568 1242 aa27.47■■□□□ 1.99
TSPAN3-203ENST00000424443 FKBP3Q00688 224 aaKnown RBP27.47■■□□□ 1.99
TSPAN3-203ENST00000424443 DUOXA2Q1HG44 320 aa27.47■■□□□ 1.99
TSPAN3-203ENST00000424443 WDR49Q8IV35 697 aa27.47■■□□□ 1.99
TSPAN3-203ENST00000424443 MLKLQ8NB16 471 aa27.47■■□□□ 1.99
TSPAN3-203ENST00000424443 ZBP1Q9H171 429 aa27.47■■□□□ 1.99
TSPAN3-203ENST00000424443 TRIM49BA6NDI0 452 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 CXCL14O95715 111 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 URODP06132 367 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 CCDC85BQ15834 202 aaPredicted RBP27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 USP41Q3LFD5 358 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 LMBRD2Q68DH5 695 aaPredicted RBP27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 FAM186BQ8IYM0 893 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 PPM1EQ8WY54 764 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 CGRRF1Q99675 332 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 HERC2P3Q9BVR0 1158 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 VN1R3Q9BXE9 311 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 GPR62Q9BZJ7 368 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 INTS13Q9NVM9 706 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 DACH1Q9UI36 760 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 SSX2IPQ9Y2D8 614 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 MAPK13O15264 365 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 CTSAP10619 480 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 EPB41P11171 864 aaKnown RBP27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 KRT13P13646 458 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 PMS1P54277 932 aaKnown RBP27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 NLRP12P59046 1061 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 C9orf57Q5W0N0 161 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 CEP57Q86XR8 500 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 C3orf58Q8NDZ4 430 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 MTMR12Q9C0I1 747 aa27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 MRPL17Q9NRX2 175 aaKnown RBP27.46■■□□□ 1.99
TSPAN3-203ENST00000424443 FSCN2O14926 492 aa27.45■■□□□ 1.98
TSPAN3-203ENST00000424443 AKAP3O75969 853 aa27.45■■□□□ 1.98
TSPAN3-203ENST00000424443 FAM171A1Q5VUB5 890 aa27.45■■□□□ 1.98
TSPAN3-203ENST00000424443 SASS6Q6UVJ0 657 aa27.45■■□□□ 1.98
TSPAN3-203ENST00000424443 INTS8Q75QN2 995 aaKnown RBP27.45■■□□□ 1.98
TSPAN3-203ENST00000424443 EEF2KMTQ96G04 330 aa27.45■■□□□ 1.98
TSPAN3-203ENST00000424443 ITGA11Q9UKX5 1188 aa27.45■■□□□ 1.98
TSPAN3-203ENST00000424443 PRRC2BQ5JSZ5 2229 aaKnown RBP27.45■■□□□ 1.98
TSPAN3-203ENST00000424443 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 KRT19P08727 400 aa27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 BRCC3P46736 316 aa27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 GLUD2P49448 558 aa27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 STX17P56962 302 aa27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 CAVIN1Q6NZI2 390 aaKnown RBP27.44■■□□□ 1.98
TSPAN3-203ENST00000424443 TAS1R1Q7RTX1 841 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms