RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TCF25Q9BQ70 676 aa20.03■□□□□ 0.8
HDAC6-205ENST00000423941 RBAKQ9NYW8 714 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-205ENST00000423941 KIAA1468Q9P260 1216 aa20.03■□□□□ 0.8
HDAC6-205ENST00000423941 MAPK8IP1Q9UQF2 711 aa20.03■□□□□ 0.8
HDAC6-205ENST00000423941 PCDHGC5Q9Y5F6 944 aa20.03■□□□□ 0.8
HDAC6-205ENST00000423941 C2orf71A6NGG8 1288 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 PODXLO00592 558 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 TADA2AO75478 443 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 B3GAT3O94766 335 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 DSG1Q02413 1049 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 HYAL1Q12794 435 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 KCNC3Q14003 757 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 TMEM132DQ14C87 1099 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 SNRNP35Q16560 246 aaKnown RBP20.02■□□□□ 0.8
HDAC6-205ENST00000423941 ADSSL1Q8N142 457 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 CXorf38Q8TB03 319 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 GPT2Q8TD30 523 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 FAM212AQ96EL1 285 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 GZF1Q9H116 711 aaPredicted RBP20.02■□□□□ 0.8
HDAC6-205ENST00000423941 CLSTN2Q9H4D0 955 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 PDE11AQ9HCR9 933 aa20.02■□□□□ 0.8
HDAC6-205ENST00000423941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.01■□□□□ 0.79
HDAC6-205ENST00000423941 HIDE1A8MVS5 230 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 PIRO00625 290 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 CXCL14O95715 111 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 NR3C1P04150 777 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 AARSP49588 968 aaKnown RBP eCLIP20.01■□□□□ 0.79
HDAC6-205ENST00000423941 ELAVL2Q12926 359 aaKnown RBP20.01■□□□□ 0.79
HDAC6-205ENST00000423941 SMC1AQ14683 1233 aaKnown RBP20.01■□□□□ 0.79
HDAC6-205ENST00000423941 SURF1Q15526 300 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 PTPN14Q15678 1187 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 CCDC85BQ15834 202 aaPredicted RBP20.01■□□□□ 0.79
HDAC6-205ENST00000423941 EDRF1Q3B7T1 1238 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 TMEM130Q8N3G9 435 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 TRIML1Q8N9V2 468 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 BEST2Q8NFU1 509 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 MICAL1Q8TDZ2 1067 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 SCN1AP35498 2009 aa20.01■□□□□ 0.79
HDAC6-205ENST00000423941 SF3B1O75533 1304 aaKnown RBP eCLIP20.01■□□□□ 0.79
HDAC6-205ENST00000423941 PPP1R3GB7ZBB8 358 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 GOLGA6L22H0YM25 854 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 MAPK13O15264 365 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 NCK2O43639 380 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 CALUO43852 315 aaPredicted RBP20■□□□□ 0.79
HDAC6-205ENST00000423941 FGFR3P22607 806 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 CYP2J2P51589 502 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 CLDN10P78369 228 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 CYP24A1Q07973 514 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 PSMD6Q15008 389 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 CAMK4Q16566 473 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 DUSP6Q16828 381 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 USP41Q3LFD5 358 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 FOXR2Q6PJQ5 311 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 ZC3H3Q8IXZ2 948 aaKnown RBP20■□□□□ 0.79
HDAC6-205ENST00000423941 CDCA3Q99618 268 aaPredicted RBP20■□□□□ 0.79
HDAC6-205ENST00000423941 RXFP1Q9HBX9 757 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 ENTPD7Q9NQZ7 604 aa20■□□□□ 0.79
HDAC6-205ENST00000423941 EXOC3O60645 756 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 CD44P16070 742 aaKnown RBP19.99■□□□□ 0.79
HDAC6-205ENST00000423941 PAX3P23760 479 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 PPP1R2P41236 205 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 GUCY2FP51841 1108 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 ADAM15Q13444 863 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 BMS1Q14692 1282 aaKnown RBP19.99■□□□□ 0.79
HDAC6-205ENST00000423941 PLPP4Q5VZY2 271 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 C9orf57Q5W0N0 161 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 RDH13Q8NBN7 331 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 HASPINQ8TF76 798 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 AUTS2Q8WXX7 1259 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 DHTKD1Q96HY7 919 aaPredicted RBP19.99■□□□□ 0.79
HDAC6-205ENST00000423941 SUSD3Q96L08 255 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 INTS13Q9NVM9 706 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 DPP3Q9NY33 737 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 SSX2IPQ9Y2D8 614 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 PTPRJQ12913 1337 aa19.99■□□□□ 0.79
HDAC6-205ENST00000423941 PPEF2O14830 753 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 TRAPPC3O43617 180 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 GTF2F1P35269 517 aaKnown RBP eCLIP19.98■□□□□ 0.793e-6■■■■□ 25.9
HDAC6-205ENST00000423941 GLUD2P49448 558 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 CASP4P49662 377 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 ENPEPQ07075 957 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 ISM2Q6H9L7 571 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 TMEM184AQ6ZMB5 413 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.98■□□□□ 0.79
HDAC6-205ENST00000423941 WDR49Q8IV35 697 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 MICALL1Q8N3F8 863 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 EFHBQ8N7U6 833 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 C1orf127Q8N9H9 656 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 PLEKHO2Q8TD55 490 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 PARD3BQ8TEW8 1205 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 CACTINQ8WUQ7 758 aaKnown RBP19.98■□□□□ 0.79
HDAC6-205ENST00000423941 PIK3R5Q8WYR1 880 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 PPP2R3CQ969Q6 453 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 PABPC5Q96DU9 382 aaKnown RBP19.98■□□□□ 0.79
HDAC6-205ENST00000423941 BORCS6Q96GS4 357 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 TLE6Q9H808 572 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 MRPL17Q9NRX2 175 aaKnown RBP19.98■□□□□ 0.79
HDAC6-205ENST00000423941 FNIP2Q9P278 1114 aa19.98■□□□□ 0.79
HDAC6-205ENST00000423941 FSD2A1L4K1 749 aa19.97■□□□□ 0.79
HDAC6-205ENST00000423941 M0QZQ0 153 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms