RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 CENPSQ8N2Z9 138 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 KLF15Q9UIH9 416 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 CCDC105Q8IYK2 499 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 TTC13Q8NBP0 860 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 RMDN1Q96DB5 314 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 SMCO2A6NFE2 343 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 ATP2A1O14983 1001 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 SERPINB7O75635 380 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 KRT6AP02538 564 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 KRT6BP04259 564 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 UBL4AP11441 157 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 BRAFP15056 766 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 ADD1P35611 737 aaKnown RBP3.6□□□□□ -1.83
SYNE1-212ENST00000423061 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.6□□□□□ -1.83
SYNE1-212ENST00000423061 HERC5Q9UII4 1024 aaKnown RBP3.6□□□□□ -1.83
SYNE1-212ENST00000423061 NCF2P19878 526 aaPredicted RBP3.6□□□□□ -1.83
SYNE1-212ENST00000423061 DNASE1L3Q13609 305 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 MTMR2Q13614 643 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 PIGWQ7Z7B1 504 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 PHKBQ93100 1093 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 PPP1R10Q96QC0 940 aaKnown RBP3.6□□□□□ -1.83
SYNE1-212ENST00000423061 PRRG3Q9BZD7 231 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 GAS7O60861 476 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 STRN3Q13033 797 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 SNTG2Q9NY99 539 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 TTI1O43156 1089 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 PEX11AO75192 247 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 ZWINTO95229 277 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 STX3Q13277 289 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 DEPDC1Q5TB30 811 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 ADNPQ9H2P0 1102 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 FANCFQ9NPI8 374 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 PTTG2Q9NZH5 202 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 GPC3P51654 580 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 ZNF786Q8N393 782 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 PYDC1Q8WXC3 89 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 IRGQQ8WZA9 623 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 TAMM41Q96BW9 452 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 ASIC4Q96FT7 647 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 ATP13A3Q9H7F0 1226 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 CLK4Q9HAZ1 481 aaKnown RBP3.6□□□□□ -1.83
SYNE1-212ENST00000423061 GPRC5DQ9NZD1 345 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 PRKAG3Q9UGI9 489 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 FBXO40Q9UH90 709 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 MRPS7Q9Y2R9 242 aaKnown RBP3.6□□□□□ -1.83
SYNE1-212ENST00000423061 MLH3Q9UHC1 1453 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 ITGA4P13612 1032 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 KIAA1755Q5JYT7 1200 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 CLPTM1LQ96KA5 538 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 CNPY3Q9BT09 278 aa3.6□□□□□ -1.83
SYNE1-212ENST00000423061 GYPCP04921 128 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 GRIN1Q05586 938 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 EMC10Q5UCC4 262 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 SEPT8Q92599 483 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 EPB41L1Q9H4G0 881 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-212ENST00000423061 VANGL2Q9ULK5 521 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 A0A0D9SFI3 127 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 TBKBP1A7MCY6 615 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 THAP12O43422 761 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 PHF2O75151 1096 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 MYO1DO94832 1006 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 EVI2BP34910 448 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 NCOA4Q13772 614 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 SHC4Q6S5L8 630 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 DDI1Q8WTU0 396 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 TBC1D14Q9P2M4 693 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 RCCD1A6NED2 376 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 TLR2O60603 784 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 HSMCR30P0CW71 290 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 OGFOD2Q6N063 350 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 DMRTB1Q96MA1 342 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 NDFIP2Q9NV92 336 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 SNX3O60493 162 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 BAIAP3O94812 1187 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 GM2AP17900 193 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 TXNDC2Q86VQ3 553 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 KCNH5Q8NCM2 988 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 BRSK1Q8TDC3 778 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 MTMR9Q96QG7 549 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 SP140LQ9H930 580 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 ARHGEF3Q9NR81 526 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 AMACRQ9UHK6 382 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 AGTP01019 485 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 PMF1-BGLAPU3KQ54 211 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 NADKO95544 446 aaPredicted RBP3.59□□□□□ -1.83
SYNE1-212ENST00000423061 IRX4P78413 519 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 POU5F1BQ06416 359 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 AMIGO2Q86SJ2 522 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 PPP1R36Q96LQ0 422 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 GCNAQ96QF7 691 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 FMO2Q99518 471 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 MYD88Q99836 296 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 RPRD1BQ9NQG5 326 aaKnown RBP3.59□□□□□ -1.83
SYNE1-212ENST00000423061 PI4KBQ9UBF8 816 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 WARS2Q9UGM6 360 aaKnown RBP3.59□□□□□ -1.83
SYNE1-212ENST00000423061 DLC1Q96QB1 1528 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 SETBP1Q9Y6X0 1596 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 FUCA1P04066 466 aa3.59□□□□□ -1.83
SYNE1-212ENST00000423061 EVA1CP58658 441 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms