RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 PHACTR3Q96KR7 559 aa5.43□□□□□ -1.54
LINC00397-201ENST00000422074 ALG13Q9NP73 1137 aaKnown RBP5.43□□□□□ -1.54
LINC00397-201ENST00000422074 MAST3O60307 1309 aa5.43□□□□□ -1.54
LINC00397-201ENST00000422074 WASHC2CQ9Y4E1 1318 aa5.43□□□□□ -1.54
LINC00397-201ENST00000422074 COL11A2P13942 1736 aaPredicted RBP5.43□□□□□ -1.54
LINC00397-201ENST00000422074 MYADML2A6NDP7 307 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 HTRA2O43464 458 aaPredicted RBP5.42□□□□□ -1.54
LINC00397-201ENST00000422074 MT-CO1P00395 513 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 FOSP01100 380 aaPredicted RBP5.42□□□□□ -1.54
LINC00397-201ENST00000422074 FGFR4P22455 802 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 SEC24CP53992 1094 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 CXADRP78310 365 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 ITKQ08881 620 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 ABCB5Q2M3G0 1257 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 SPDYE7PQ495Y7 208 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 MIGA2Q7L4E1 593 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 UBE3BQ7Z3V4 1068 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 RHOT1Q8IXI2 618 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 PPM1NQ8N819 430 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 NLGN4YQ8NFZ3 816 aaPredicted RBP5.42□□□□□ -1.54
LINC00397-201ENST00000422074 HDAC10Q969S8 669 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 COA7Q96BR5 231 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 MRGPRX4Q96LA9 322 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 TEKT5Q96M29 485 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 ZSWIM1Q9BR11 485 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 CCDC8Q9H0W5 538 aaPredicted RBP5.42□□□□□ -1.54
LINC00397-201ENST00000422074 C11orf54Q9H0W9 315 aaPredicted RBP5.42□□□□□ -1.54
LINC00397-201ENST00000422074 SYNPO2LQ9H987 977 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 GALNT9Q9HCQ5 603 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.42□□□□□ -1.54
LINC00397-201ENST00000422074 LIMCH1Q9UPQ0 1083 aa5.42□□□□□ -1.54
LINC00397-201ENST00000422074 UNC119BA6NIH7 251 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 KATNA1O75449 491 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 MYBL2P10244 700 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 TYRP1P17643 537 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 SLC6A4P31645 630 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 NANOS3P60323 173 aaKnown RBP5.41□□□□□ -1.54
LINC00397-201ENST00000422074 SLFN5Q08AF3 891 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 FOXI1Q12951 378 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 PCBP2Q15366 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC00397-201ENST00000422074 GPR149Q86SP6 731 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 PRIMA1Q86XR5 153 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 LCORLQ8N3X6 602 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 Q8NA96 180 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 SUPT20HQ8NEM7 779 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 IL17RDQ8NFM7 739 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 NACC2Q96BF6 587 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 ZG16BQ96DA0 208 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 MED15Q96RN5 788 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 DMRTA2Q96SC8 542 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 ALOXE3Q9BYJ1 711 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 BRINP2Q9C0B6 783 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 GSTO2Q9H4Y5 243 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 PCDH12Q9NPG4 1184 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 CALCOCO1Q9P1Z2 691 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 SPEF1Q9Y4P9 236 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 NOX1Q9Y5S8 564 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 TNKSO95271 1327 aa5.41□□□□□ -1.54
LINC00397-201ENST00000422074 TCRBV7S2A1N4TA0A589 114 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 ESRRBO95718 433 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 MPLP40238 635 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 ADKP55263 362 aaKnown RBP5.4□□□□□ -1.54
LINC00397-201ENST00000422074 NOMO3P69849 1222 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 RAB39AQ14964 217 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 CYP2A13Q16696 494 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 ATP2B3Q16720 1220 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 NOMO2Q5JPE7 1267 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 OLFML1Q6UWY5 402 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 ZNF575Q86XF7 245 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 SLC9A6Q92581 669 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 MARS2Q96GW9 593 aaKnown RBP5.4□□□□□ -1.54
LINC00397-201ENST00000422074 PNKPQ96T60 521 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 TDP1Q9NUW8 608 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 RNF181Q9P0P0 153 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 RUVBL1Q9Y265 456 aaKnown RBP5.4□□□□□ -1.54
LINC00397-201ENST00000422074 PCDHB1Q9Y5F3 818 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 PCDHA13Q9Y5I0 950 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 MRFAP1Q9Y605 127 aa5.4□□□□□ -1.54
LINC00397-201ENST00000422074 PCSK5Q92824 1860 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 SLC43A1O75387 559 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 ERN1O75460 977 aaKnown RBP5.39□□□□□ -1.55
LINC00397-201ENST00000422074 GPANK1O95872 356 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 FDXRP22570 491 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 HSD11B2P80365 405 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 CREMQ03060 361 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 ACAP2Q15057 778 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 C3orf36Q3SXR2 165 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 PABPC1LQ4VXU2 614 aaKnown RBP5.39□□□□□ -1.55
LINC00397-201ENST00000422074 DNAJC10Q8IXB1 793 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 CMTR2Q8IYT2 770 aaKnown RBP5.39□□□□□ -1.55
LINC00397-201ENST00000422074 NSUN6Q8TEA1 469 aaKnown RBP5.39□□□□□ -1.55
LINC00397-201ENST00000422074 HSFX1Q9UBD0 423 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 USP25Q9UHP3 1055 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 COL4A3BPQ9Y5P4 624 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 AATKQ6ZMQ8 1374 aa5.39□□□□□ -1.55
LINC00397-201ENST00000422074 CCDC154A6NI56 674 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 HAUS5O94927 633 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 ZFPL1O95159 310 aa5.38□□□□□ -1.55
LINC00397-201ENST00000422074 MTHFD1P11586 935 aaKnown RBP5.38□□□□□ -1.55
LINC00397-201ENST00000422074 BMP5P22003 454 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms