RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ANKS1AQ92625 1134 aa12.98□□□□□ -0.33
CLCN4-203ENST00000421085 C7orf25Q9BPX7 421 aa12.98□□□□□ -0.33
CLCN4-203ENST00000421085 DCP1AQ9NPI6 582 aaPredicted RBP12.98□□□□□ -0.33
CLCN4-203ENST00000421085 ARHGEF37A1IGU5 675 aa12.98□□□□□ -0.33
CLCN4-203ENST00000421085 COMTP21964 271 aa12.98□□□□□ -0.33
CLCN4-203ENST00000421085 PRDX5P30044 214 aa12.98□□□□□ -0.33
CLCN4-203ENST00000421085 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
CLCN4-203ENST00000421085 TRAPPC11Q7Z392 1133 aa12.98□□□□□ -0.33
CLCN4-203ENST00000421085 E2F7Q96AV8 911 aa12.98□□□□□ -0.33
CLCN4-203ENST00000421085 CCSER1Q9C0I3 900 aa12.98□□□□□ -0.33
CLCN4-203ENST00000421085 MYO1GB0I1T2 1018 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 GH2P01242 217 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 TNFAIP2Q03169 654 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 STK4Q13043 487 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 KRT72Q14CN4 511 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 TTC39BQ5VTQ0 682 aaPredicted RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 ADGRF4Q8IZF3 695 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 SRBD1Q8N5C6 995 aaKnown RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 SERPINB12Q96P63 405 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 SENP7Q9BQF6 1050 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 TBC1D22BQ9NU19 505 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 RBAKQ9NYW8 714 aaPredicted RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 AIPL1Q9NZN9 384 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 CLK1P49759 484 aaKnown RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 KRT33BQ14525 404 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 LMBRD2Q68DH5 695 aaPredicted RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 L1RE1Q9UN81 338 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 PDS5AQ29RF7 1337 aaKnown RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 NFIBO00712 420 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 ATP6V1G2O95670 118 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 GYS1P13807 737 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 CDH2P19022 906 aaPredicted RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 GNL1P36915 607 aaPredicted RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 ANO4Q32M45 955 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 RINLQ6ZS11 566 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 OTULINQ96BN8 352 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 ARHGEF26Q96DR7 871 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 KDM4CQ9H3R0 1056 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 TASP1Q9H6P5 420 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 ZNF212Q9UDV6 495 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 AFF4Q9UHB7 1163 aaKnown RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 MYO3BQ8WXR4 1341 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 MYL2P10916 166 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 MTM1Q13496 603 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 PCYOX1LQ8NBM8 494 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 EPS8L3Q8TE67 593 aaKnown RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 KCNB2Q92953 911 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 AGAP3Q96P47 875 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 TMBIM4Q9HC24 238 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 IL1RAPL1Q9NZN1 696 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 SNUPNO95149 360 aaKnown RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 WLSQ5T9L3 541 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 CATSPER4Q7RTX7 472 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 KDELC2Q7Z4H8 507 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 CCDC103Q8IW40 242 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 NDUFAF2Q8N183 169 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 ZFYVE19Q96K21 471 aa12.97□□□□□ -0.33
CLCN4-203ENST00000421085 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
CLCN4-203ENST00000421085 SNRPAP09012 282 aaKnown RBP12.96□□□□□ -0.33
CLCN4-203ENST00000421085 ADORA2BP29275 332 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 HSPA13P48723 471 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 COPAP53621 1224 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.33
CLCN4-203ENST00000421085 FAM49AQ9H0Q0 323 aaPredicted RBP12.96□□□□□ -0.33
CLCN4-203ENST00000421085 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 PAPOLBQ9NRJ5 636 aaKnown RBP12.96□□□□□ -0.33
CLCN4-203ENST00000421085 HEY2Q9UBP5 337 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 ORC4O43929 436 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 HUS1O60921 280 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 BBOX1O75936 387 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 FMO5P49326 533 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 USP11P51784 963 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 C6orf10Q5SRN2 563 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 ZNF786Q8N393 782 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 BRD8Q9H0E9 1235 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 POLR3FQ9H1D9 316 aaPredicted RBP12.96□□□□□ -0.33
CLCN4-203ENST00000421085 HERC5Q9UII4 1024 aaKnown RBP12.96□□□□□ -0.33
CLCN4-203ENST00000421085 KDM6BO15054 1643 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 MYO1DO94832 1006 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 COILP38432 576 aaPredicted RBP12.96□□□□□ -0.33
CLCN4-203ENST00000421085 USP49Q70CQ1 688 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 GPR141Q7Z602 305 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 NMD3Q96D46 503 aaKnown RBP12.96□□□□□ -0.33
CLCN4-203ENST00000421085 SHCBP1LQ9BZQ2 653 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 IL1RL2Q9HB29 575 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 TMEM2Q9UHN6 1383 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 DFFAO00273 331 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 DLGAP3O95886 979 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 SLC9A1P19634 815 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 USP10Q14694 798 aaKnown RBP12.96□□□□□ -0.33
CLCN4-203ENST00000421085 HAUS6Q7Z4H7 955 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 DDI1Q8WTU0 396 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 EPAS1Q99814 870 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 ZNF341Q9BYN7 854 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 FOXP3Q9BZS1 431 aa12.96□□□□□ -0.33
CLCN4-203ENST00000421085 PRR23D1E9PI22 279 aaPredicted RBP12.96□□□□□ -0.34
CLCN4-203ENST00000421085 PRR23D2P0DMB1 279 aaPredicted RBP12.96□□□□□ -0.34
CLCN4-203ENST00000421085 ERVK-24P63145 666 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms