RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 GPR153Q6NV75 609 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 DCLRE1AQ6PJP8 1040 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 C11orf57Q6ZUT1 292 aaPredicted RBP16.37■□□□□ 0.21
CDRT15-201ENST00000420162 FAM114A1Q8IWE2 563 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 EFCAB13Q8IY85 973 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 ANKRD36BP1Q96IX9 119 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 BPIFA3Q9BQP9 254 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 C17orf80Q9BSJ5 609 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 C11orf84Q9BUA3 381 aaPredicted RBP16.37■□□□□ 0.21
CDRT15-201ENST00000420162 THAP9Q9H5L6 903 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 ZNF576Q9H609 170 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 DPP3Q9NY33 737 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 LAMA3Q16787 3333 aa16.37■□□□□ 0.21
CDRT15-201ENST00000420162 CASTOR2A6NHX0 329 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 SOX1O00570 391 aaPredicted RBP16.36■□□□□ 0.21
CDRT15-201ENST00000420162 STX10O60499 249 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 TMEM191BP0C7N4 346 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 PAX3P23760 479 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 GTF2H1P32780 548 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 MARSP56192 900 aaKnown RBP16.36■□□□□ 0.21
CDRT15-201ENST00000420162 KRT17Q04695 432 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 CCDC40Q4G0X9 1142 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 SLC39A11Q8N1S5 342 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 IGSF21Q96ID5 467 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 POP1Q99575 1024 aaKnown RBP16.36■□□□□ 0.21
CDRT15-201ENST00000420162 GZF1Q9H116 711 aaPredicted RBP16.36■□□□□ 0.21
CDRT15-201ENST00000420162 STK39Q9UEW8 545 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 TUBGCP4Q9UGJ1 667 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 ITGA11Q9UKX5 1188 aa16.36■□□□□ 0.21
CDRT15-201ENST00000420162 NLRC5Q86WI3 1866 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 LRRIQ3A6PVS8 624 aaPredicted RBP16.35■□□□□ 0.21
CDRT15-201ENST00000420162 TMEM189-UBE2V1I3L0A0 370 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 PODXLO00592 558 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 ZNF165P49910 485 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 CLCNKBP51801 687 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 PLCB3Q01970 1234 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 MYL5Q02045 173 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 KLHL23Q8NBE8 558 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 FBXO22Q8NEZ5 403 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 OR5B17Q8NGF7 314 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 PLEKHO2Q8TD55 490 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 TMEM169Q96HH4 297 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 GOLGA2P5Q9HBQ8 144 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 PUF60Q9UHX1 559 aaKnown RBP16.35■□□□□ 0.21
CDRT15-201ENST00000420162 MTUS1Q9ULD2 1270 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 PRG3Q9Y2Y8 225 aaPredicted RBP16.35■□□□□ 0.21
CDRT15-201ENST00000420162 R3HCC1Q9Y3T6 440 aaKnown RBP16.35■□□□□ 0.21
CDRT15-201ENST00000420162 NFE2L3Q9Y4A8 694 aa16.35■□□□□ 0.21
CDRT15-201ENST00000420162 ANO9A1A5B4 782 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 SMTNL1A8MU46 457 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 NT5C1B-RDH14C9J2C7 533 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 H3BNC9 293 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 PIRO00625 290 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 TRAPPC3O43617 180 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 TADA2AO75478 443 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 FGF18O76093 207 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 B3GAT3O94766 335 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 PBX3P40426 434 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 DLG4P78352 724 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 RBP5P82980 135 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 UBE3AQ05086 875 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 ZNF697Q5TEC3 545 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 C9orf57Q5W0N0 161 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 LMBRD2Q68DH5 695 aaPredicted RBP16.34■□□□□ 0.21
CDRT15-201ENST00000420162 TRAPPC11Q7Z392 1133 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 C1orf127Q8N9H9 656 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 ARNTL2Q8WYA1 636 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 ZNF516Q92618 1163 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 LRCH3Q96II8 777 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 PAAF1Q9BRP4 392 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 MTMR12Q9C0I1 747 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 MAGEC2Q9UBF1 373 aaPredicted RBP16.34■□□□□ 0.21
CDRT15-201ENST00000420162 ADAM28Q9UKQ2 775 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 LZTS1Q9Y250 596 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 PTPRJQ12913 1337 aa16.34■□□□□ 0.21
CDRT15-201ENST00000420162 KIAA1671Q9BY89 1806 aa16.33■□□□□ 0.21
CDRT15-201ENST00000420162 CHD9Q3L8U1 2897 aa16.33■□□□□ 0.21
CDRT15-201ENST00000420162 PHACTR2O75167 634 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 PNPLA4P41247 253 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 GUCY2FP51841 1108 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 ELAVL2Q12926 359 aaKnown RBP16.33■□□□□ 0.2
CDRT15-201ENST00000420162 GPM6BQ13491 265 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 C1orf220Q5T0J3 134 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 TCERG1LQ5VWI1 586 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 LRSAM1Q6UWE0 723 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 SPRED2Q7Z698 418 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 DDX53Q86TM3 631 aaKnown RBP16.33■□□□□ 0.2
CDRT15-201ENST00000420162 IRF2BP1Q8IU81 584 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 TRIM59Q8IWR1 403 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 RABGGTAQ92696 567 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 CNOT6LQ96LI5 555 aaKnown RBP16.33■□□□□ 0.2
CDRT15-201ENST00000420162 CERS4Q9HA82 394 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 MARCH5Q9NX47 278 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 CACNG4Q9UBN1 327 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 NUB1Q9Y5A7 615 aa16.33■□□□□ 0.2
CDRT15-201ENST00000420162 KIF4AO95239 1232 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 C4BPAP04003 597 aaKnown RBP16.32■□□□□ 0.2
CDRT15-201ENST00000420162 ITGB3P05106 788 aa16.32■□□□□ 0.2
CDRT15-201ENST00000420162 ITGB1P05556 798 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms