RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 ST13P4Q8IZP2 240 aaPredicted RBP12.4□□□□□ -0.42
DDR1-232ENST00000418800 ARL10Q8N8L6 244 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 C11orf70Q9BRQ4 267 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 FBXO6Q9NRD1 293 aaPredicted RBP12.4□□□□□ -0.42
DDR1-232ENST00000418800 GRHL1Q9NZI5 618 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 BANF1O75531 89 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 NEK3P51956 506 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 GPS1Q13098 491 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 ARHGEF19Q8IW93 802 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 CPXCR1Q8N123 301 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 ASAP3Q8TDY4 903 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 PHF12Q96QT6 1004 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 CYP4F11Q9HBI6 524 aa12.4□□□□□ -0.42
DDR1-232ENST00000418800 ROBO1Q9Y6N7 1651 aa12.4□□□□□ -0.43
DDR1-232ENST00000418800 A6NJR5 290 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 CDH16O75309 829 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 FGRP09769 529 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 RALAP11233 206 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 MTFR1Q15390 333 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 ZNF394Q53GI3 561 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 LVRNQ6Q4G3 990 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 VSTM1Q6UX27 236 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 RGS9BPQ6ZS82 235 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 LCA5Q86VQ0 697 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 MAP7D3Q8IWC1 876 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 RIBC1Q8N443 379 aaPredicted RBP12.39□□□□□ -0.43
DDR1-232ENST00000418800 GSDMBQ8TAX9 411 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 SNF8Q96H20 258 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 LARSQ9P2J5 1176 aaKnown RBP12.39□□□□□ -0.43
DDR1-232ENST00000418800 AKAP11Q9UKA4 1901 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 B2RBV5 119 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 EML1O00423 815 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 PPP1R11O60927 126 aaPredicted RBP12.39□□□□□ -0.43
DDR1-232ENST00000418800 TTC4O95801 387 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 PKN2Q16513 984 aaKnown RBP12.39□□□□□ -0.43
DDR1-232ENST00000418800 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.39□□□□□ -0.43
DDR1-232ENST00000418800 MPP4Q96JB8 637 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 ETNK2Q9NVF9 386 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 NDE1Q9NXR1 346 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 USP20Q9Y2K6 914 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 LIN7AO14910 233 aaPredicted RBP12.39□□□□□ -0.43
DDR1-232ENST00000418800 TJP3O95049 919 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 NPTXRO95502 500 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 TAC1P20366 129 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 PSMC4P43686 418 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 FAM102BQ5T8I3 360 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 SLF2Q8IX21 1173 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 PALM2Q8IXS6 379 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 MAGEB18Q96M61 343 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 FAM210AQ96ND0 272 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 FNBP1Q96RU3 617 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 CBWD1Q9BRT8 395 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 SYNCQ9H7C4 482 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 GINM1Q9NU53 330 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 GGA1Q9UJY5 639 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 AGTPBP1Q9UPW5 1226 aa12.39□□□□□ -0.43
DDR1-232ENST00000418800 ETS1P14921 441 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 HSPA6P17066 643 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 PDIA2Q13087 525 aaKnown RBP12.38□□□□□ -0.43
DDR1-232ENST00000418800 RINT1Q6NUQ1 792 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 SLC26A7Q8TE54 656 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 TMEM150BA6NC51 233 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 SLC16A4O15374 487 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 KRT4P19013 534 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 TNNI1P19237 187 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 VCAM1P19320 739 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 MAGEA4P43358 317 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 ARFIP2P53365 341 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 ATXN3P54252 364 aaPredicted RBP12.38□□□□□ -0.43
DDR1-232ENST00000418800 PPATQ06203 517 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 RASGEF1CQ8N431 466 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 CLPTM1LQ96KA5 538 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 EPB41L4BQ9H329 900 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 CD209Q9NNX6 404 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 NINJ2Q9NZG7 142 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.38□□□□□ -0.43
DDR1-232ENST00000418800 MYH1P12882 1939 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 MYH4Q9Y623 1939 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 FAM86B1E9PN63 330 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 CCDC22O60826 627 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 TBX10O75333 385 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 LMNAP02545 664 aaKnown RBP12.38□□□□□ -0.43
DDR1-232ENST00000418800 FAM86B2P0C5J1 330 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 POLD1P28340 1107 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 VAMP7P51809 220 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 SLC12A3P55017 1021 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 PEX3P56589 373 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 DCUN1D2Q6PH85 259 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 MTHFD1LQ6UB35 978 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 TRMT10CQ7L0Y3 403 aaKnown RBP12.38□□□□□ -0.43
DDR1-232ENST00000418800 KIFC3Q9BVG8 833 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 AMNQ9BXJ7 453 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 ZC3H12CQ9C0D7 883 aaKnown RBP12.38□□□□□ -0.43
DDR1-232ENST00000418800 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 FAF1Q9UNN5 650 aaPredicted RBP12.38□□□□□ -0.43
DDR1-232ENST00000418800 ASTN1O14525 1302 aa12.38□□□□□ -0.43
DDR1-232ENST00000418800 PTPN4P29074 926 aa12.37□□□□□ -0.43
DDR1-232ENST00000418800 RPA3P35244 121 aaPredicted RBP12.37□□□□□ -0.43
DDR1-232ENST00000418800 SLC34A1Q06495 639 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms