RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 GOLGA8JA6NMD2 632 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 HIDE1A8MVS5 230 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 PODXLO00592 558 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 DSG1Q02413 1049 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 SMC1AQ14683 1233 aaKnown RBP20.24■□□□□ 0.83
PTCD3-204ENST00000418628 TMEM132DQ14C87 1099 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 PLPP4Q5VZY2 271 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 DCLRE1AQ6PJP8 1040 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 SMYD4Q8IYR2 804 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-204ENST00000418628 MICALL1Q8N3F8 863 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 XXYLT1Q8NBI6 393 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 GZF1Q9H116 711 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-204ENST00000418628 KIAA1586Q9HCI6 787 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 RBAKQ9NYW8 714 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-204ENST00000418628 MAN1B1Q9UKM7 699 aa20.24■□□□□ 0.83
PTCD3-204ENST00000418628 ANO9A1A5B4 782 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 CLIC2O15247 247 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 XPOTO43592 962 aaKnown RBP20.23■□□□□ 0.83
PTCD3-204ENST00000418628 KIF20AO95235 890 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 BMP6P22004 513 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 AARSP49588 968 aaKnown RBP eCLIP20.23■□□□□ 0.83
PTCD3-204ENST00000418628 MYBPC2Q14324 1141 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 CCDC85BQ15834 202 aaPredicted RBP20.23■□□□□ 0.83
PTCD3-204ENST00000418628 SNRNP35Q16560 246 aaKnown RBP20.23■□□□□ 0.83
PTCD3-204ENST00000418628 DUSP6Q16828 381 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 KIAA0319Q5VV43 1072 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 TAS1R1Q7RTX1 841 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 MRPL43Q8N983 215 aaKnown RBP20.23■□□□□ 0.83
PTCD3-204ENST00000418628 CXorf38Q8TB03 319 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 HASPINQ8TF76 798 aa20.23■□□□□ 0.83
PTCD3-204ENST00000418628 GTPBP4Q9BZE4 634 aaKnown RBP20.23■□□□□ 0.83
PTCD3-204ENST00000418628 CSPG5O95196 566 aa20.22■□□□□ 0.83
PTCD3-204ENST00000418628 GTF2F1P35269 517 aaKnown RBP eCLIP20.22■□□□□ 0.83
PTCD3-204ENST00000418628 PRCPP42785 496 aa20.22■□□□□ 0.83
PTCD3-204ENST00000418628 GUCY2FP51841 1108 aa20.22■□□□□ 0.83
PTCD3-204ENST00000418628 MORC3Q14149 939 aa20.22■□□□□ 0.83
PTCD3-204ENST00000418628 TMC7Q7Z402 723 aa20.22■□□□□ 0.83
PTCD3-204ENST00000418628 AUTS2Q8WXX7 1259 aa20.22■□□□□ 0.83
PTCD3-204ENST00000418628 CDCA3Q99618 268 aaPredicted RBP20.22■□□□□ 0.83
PTCD3-204ENST00000418628 CLSTN2Q9H4D0 955 aa20.22■□□□□ 0.83
PTCD3-204ENST00000418628 PTPRJQ12913 1337 aa20.22■□□□□ 0.83
PTCD3-204ENST00000418628 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.21■□□□□ 0.83
PTCD3-204ENST00000418628 FSD2A1L4K1 749 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 ZNF233A6NK53 670 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 PIRO00625 290 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 PPEF2O14830 753 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 B3GAT3O94766 335 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 GLP2RO95838 553 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 NR3C1P04150 777 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 FGFR3P22607 806 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 GLUD2P49448 558 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 CYP2J2P51589 502 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 MCCD1P59942 119 aaPredicted RBP20.21■□□□□ 0.83
PTCD3-204ENST00000418628 CYP24A1Q07973 514 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 ELAVL2Q12926 359 aaKnown RBP20.21■□□□□ 0.83
PTCD3-204ENST00000418628 USP41Q3LFD5 358 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 RTP2Q5QGT7 225 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 CENPPQ6IPU0 288 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.21■□□□□ 0.83
PTCD3-204ENST00000418628 ZC3H3Q8IXZ2 948 aaKnown RBP20.21■□□□□ 0.83
PTCD3-204ENST00000418628 ADSSL1Q8N142 457 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 EFHBQ8N7U6 833 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 BEST2Q8NFU1 509 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 VN1R2Q8NFZ6 395 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 PPP2R3CQ969Q6 453 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 PABPC5Q96DU9 382 aaKnown RBP20.21■□□□□ 0.83
PTCD3-204ENST00000418628 FAM212AQ96EL1 285 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 MFSD14AQ96MC6 490 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 RXFP1Q9HBX9 757 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 PDE11AQ9HCR9 933 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 PRDM6Q9NQX0 595 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 MAPK8IP1Q9UQF2 711 aa20.21■□□□□ 0.83
PTCD3-204ENST00000418628 DOCK8Q8NF50 2099 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 MAPK13O15264 365 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 NCK2O43639 380 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 TADA2AO75478 443 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 URODP06132 367 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 LTBRP36941 435 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 PSMD6Q15008 389 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 EDRF1Q3B7T1 1238 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 C9orf57Q5W0N0 161 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 GPT2Q8TD30 523 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 PPM1EQ8WY54 764 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 PIK3R5Q8WYR1 880 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 SUSD3Q96L08 255 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 KIAA1468Q9P260 1216 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 NOTCH4Q99466 2003 aa20.2■□□□□ 0.82
PTCD3-204ENST00000418628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.19■□□□□ 0.82
PTCD3-204ENST00000418628 M0QZQ0 153 aa20.19■□□□□ 0.82
PTCD3-204ENST00000418628 CALUO43852 315 aaPredicted RBP20.19■□□□□ 0.82
PTCD3-204ENST00000418628 TBX10O75333 385 aa20.19■□□□□ 0.82
PTCD3-204ENST00000418628 CD44P16070 742 aaKnown RBP20.19■□□□□ 0.82
PTCD3-204ENST00000418628 BRCC3P46736 316 aa20.19■□□□□ 0.82
PTCD3-204ENST00000418628 NRIP1P48552 1158 aa20.19■□□□□ 0.82
PTCD3-204ENST00000418628 CLDN10P78369 228 aa20.19■□□□□ 0.82
PTCD3-204ENST00000418628 ADAM15Q13444 863 aa20.19■□□□□ 0.82
PTCD3-204ENST00000418628 SURF1Q15526 300 aa20.19■□□□□ 0.82
PTCD3-204ENST00000418628 TMEM184AQ6ZMB5 413 aa20.19■□□□□ 0.82
PTCD3-204ENST00000418628 TRIML1Q8N9V2 468 aa20.19■□□□□ 0.82
PTCD3-204ENST00000418628 PLEKHO2Q8TD55 490 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms