RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 RBM19Q9Y4C8 960 aaKnown RBP11.15□□□□□ -0.62
HDLBP-206ENST00000417540 ZNF318Q5VUA4 2279 aa11.15□□□□□ -0.62
HDLBP-206ENST00000417540 A0A0B4J269 797 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 A0A1B0GVL5 298 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 TTC26A0AVF1 554 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 LOC730098B7Z3J9 87 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 TMEM189-UBE2V1I3L0A0 370 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 SPTLC1O15269 473 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 OGTO15294 1046 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 CLDN3O15551 220 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 N4BP1O75113 896 aaKnown RBP11.14□□□□□ -0.63
HDLBP-206ENST00000417540 TADA2AO75478 443 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 B3GAT3O94766 335 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 GLUD1P00367 558 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 OR4Q2P0C623 313 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 AFMP43652 599 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 NTHL1P78549 312 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 PPP2R3AQ06190 1150 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 CCDC142Q17RM4 750 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 KIAA1841Q6NSI8 718 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 ZNF720Q7Z2F6 126 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 KCTD17Q8N5Z5 321 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 LNX1Q8TBB1 728 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-206ENST00000417540 NOC3LQ8WTT2 800 aaKnown RBP11.14□□□□□ -0.63
HDLBP-206ENST00000417540 PIK3R5Q8WYR1 880 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 CLSTN3Q9BQT9 956 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 COLEC11Q9BWP8 271 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 TOPORSQ9NS56 1045 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-206ENST00000417540 PANK4Q9NVE7 773 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 KBTBD4Q9NVX7 518 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 FBXW11Q9UKB1 542 aa11.14□□□□□ -0.63
HDLBP-206ENST00000417540 CPSF3Q9UKF6 684 aaKnown RBP11.14□□□□□ -0.63
HDLBP-206ENST00000417540 TIMM13Q9Y5L4 95 aaPredicted RBP11.14□□□□□ -0.63
HDLBP-206ENST00000417540 KIF26AQ9ULI4 1882 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-206ENST00000417540 NCK2O43639 380 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 KLRC4O43908 158 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 ASGR2P07307 311 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 ADH1AP07327 375 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 ADRB2P07550 413 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 FGFR3P22607 806 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 EHHADHQ08426 723 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 USP41Q3LFD5 358 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 HERC4Q5GLZ8 1057 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-206ENST00000417540 TMEM31Q5JXX7 168 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 VARS2Q5ST30 1063 aaKnown RBP11.13□□□□□ -0.63
HDLBP-206ENST00000417540 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-206ENST00000417540 ALYREFQ86V81 257 aaKnown RBP11.13□□□□□ -0.63
HDLBP-206ENST00000417540 RNF135Q8IUD6 432 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 NELFCDQ8IXH7 590 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 KIAA0895Q8NCT3 520 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 TMEM209Q96SK2 561 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 TTPALQ9BTX7 342 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 PHF7Q9BWX1 381 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-206ENST00000417540 EMILIN2Q9BXX0 1053 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 ST6GALNAC4Q9H4F1 302 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 PCIF1Q9H4Z3 704 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 OLFML3Q9NRN5 406 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 DZANK1Q9NVP4 752 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 MTRRQ9UBK8 725 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 HPSEQ9Y251 543 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 CDY1Q9Y6F8 540 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 MYO10Q9HD67 2058 aa11.13□□□□□ -0.63
HDLBP-206ENST00000417540 WDR27A2RRH5 827 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 CCL16O15467 120 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 HCRTO43612 131 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 VNN2O95498 520 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 CLTAP09496 248 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 SRGAP2BP0DMP2 458 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 GAP43P17677 238 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 MCM4P33991 863 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 NDUFA8P51970 172 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 ROR1Q01973 937 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 PUS10Q3MIT2 529 aaKnown RBP11.12□□□□□ -0.63
HDLBP-206ENST00000417540 FAM26FQ5R3K3 315 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 ADALQ6DHV7 355 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 GET4Q7L5D6 327 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-206ENST00000417540 BRSK2Q8IWQ3 736 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 POMGNT1Q8WZA1 660 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 SPATA32Q96LK8 384 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 FAM213AQ9BRX8 229 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 ADAM7Q9H2U9 754 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 HCFC1R1Q9NWW0 138 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 RCOR1Q9UKL0 485 aa11.12□□□□□ -0.63
HDLBP-206ENST00000417540 AGO2Q9UKV8 859 aaKnown RBP11.12□□□□□ -0.63
HDLBP-206ENST00000417540 NUP210Q8TEM1 1887 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-206ENST00000417540 CLUHO75153 1309 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 MYO16Q9Y6X6 1858 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 H0YCG3 227 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-206ENST00000417540 NR1I2O75469 434 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 C8AP07357 584 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 KRT85P78386 507 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 TMEM132DQ14C87 1099 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 POTEHQ6S545 545 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 EPM2AIP1Q7L775 607 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-206ENST00000417540 APBB1IPQ7Z5R6 666 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-206ENST00000417540 CBWD2Q8IUF1 395 aa11.11□□□□□ -0.63
HDLBP-206ENST00000417540 FSIP1Q8NA03 581 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms