RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 NUCKS1Q9H1E3 243 aaKnown RBP12.84□□□□□ -0.35
GABRE-202ENST00000417300 CDHR5Q9HBB8 845 aa12.84□□□□□ -0.35
GABRE-202ENST00000417300 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
GABRE-202ENST00000417300 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
GABRE-202ENST00000417300 TRPV2Q9Y5S1 764 aa12.84□□□□□ -0.35
GABRE-202ENST00000417300 RALGAPA2Q2PPJ7 1873 aa12.84□□□□□ -0.35
GABRE-202ENST00000417300 DCHS1Q96JQ0 3298 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 M0QZ92 97 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 CSDE1O75534 798 aaKnown RBP12.83□□□□□ -0.36
GABRE-202ENST00000417300 FGBP02675 491 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 UCHL3P15374 230 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 AP3M2P53677 418 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 POLR2FP61218 127 aaKnown RBP12.83□□□□□ -0.36
GABRE-202ENST00000417300 CDK17Q00537 523 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 NCBP1Q09161 790 aaKnown RBP12.83□□□□□ -0.36
GABRE-202ENST00000417300 PTK7Q13308 1070 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 TSR1Q2NL82 804 aaKnown RBP12.83□□□□□ -0.36
GABRE-202ENST00000417300 C15orf39Q6ZRI6 1047 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 CATSPER4Q7RTX7 472 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 APBB1IPQ7Z5R6 666 aaPredicted RBP12.83□□□□□ -0.36
GABRE-202ENST00000417300 TMTC1Q8IUR5 882 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 SLC43A3Q8NBI5 491 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 EHBP1Q8NDI1 1231 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 SYN2Q92777 582 aaPredicted RBP12.83□□□□□ -0.36
GABRE-202ENST00000417300 CPB2Q96IY4 423 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 ADPGKQ9BRR6 497 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 SEZ6LQ9BYH1 1024 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 CELF4Q9BZC1 486 aaKnown RBP12.83□□□□□ -0.36
GABRE-202ENST00000417300 INTS2Q9H0H0 1204 aaKnown RBP12.83□□□□□ -0.36
GABRE-202ENST00000417300 CERS4Q9HA82 394 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 KCND1Q9NSA2 647 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 GINS2Q9Y248 185 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 PCDHA11Q9Y5I1 949 aa12.83□□□□□ -0.36
GABRE-202ENST00000417300 TRIOO75962 3097 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 A0A0U1RQG5 324 aaPredicted RBP12.82□□□□□ -0.36
GABRE-202ENST00000417300 A0A1W2PQ45 241 aaPredicted RBP12.82□□□□□ -0.36
GABRE-202ENST00000417300 A0A1W2PQY0 241 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 ZNF500O60304 480 aaPredicted RBP12.82□□□□□ -0.36
GABRE-202ENST00000417300 CAND2O75155 1236 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 CLTAP09496 248 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 DLATP10515 647 aaKnown RBP12.82□□□□□ -0.36
GABRE-202ENST00000417300 ACTN1P12814 892 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 HOXA11P31270 313 aaPredicted RBP12.82□□□□□ -0.36
GABRE-202ENST00000417300 TNFSF9P41273 254 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 WNT7BP56706 349 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 MGAT3Q09327 533 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 PTGISQ16647 500 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 ZACNQ401N2 412 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 IER5LQ5T953 404 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 NOTUMQ6P988 496 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 WDR59Q6PJI9 974 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 CYP26C1Q6V0L0 522 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 SV2AQ7L0J3 742 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 CDR2LQ86X02 465 aaPredicted RBP12.82□□□□□ -0.36
GABRE-202ENST00000417300 WDR49Q8IV35 697 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 THNSL1Q8IYQ7 743 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 CEP120Q8N960 986 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 FBXL13Q8NEE6 735 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 TMEM40Q8WWA1 233 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 WNT8BQ93098 351 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 POP1Q99575 1024 aaKnown RBP12.82□□□□□ -0.36
GABRE-202ENST00000417300 PDE11AQ9HCR9 933 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 TOPORSQ9NS56 1045 aaPredicted RBP12.82□□□□□ -0.36
GABRE-202ENST00000417300 FAM86C1Q9NVL1 165 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 ZNHIT6Q9NWK9 470 aaKnown RBP12.82□□□□□ -0.36
GABRE-202ENST00000417300 APEX2Q9UBZ4 518 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 TBX21Q9UL17 535 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 FHOD1Q9Y613 1164 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 CDY2AQ9Y6F7 541 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 CITO14578 2027 aa12.82□□□□□ -0.36
GABRE-202ENST00000417300 GBF1Q92538 1859 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 LRRC53A6NM62 1247 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 B4GALT4O60513 344 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 ZC3H11AO75152 810 aaKnown RBP eCLIP12.81□□□□□ -0.36
GABRE-202ENST00000417300 IL18RAPO95256 599 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 C4BPAP04003 597 aaKnown RBP12.81□□□□□ -0.36
GABRE-202ENST00000417300 TNNI1P19237 187 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 FGFR4P22455 802 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 GRM5P41594 1212 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 APBA1Q02410 837 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 TCF15Q12870 199 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 ENOX2Q16206 610 aaKnown RBP12.81□□□□□ -0.36
GABRE-202ENST00000417300 SEZ6Q53EL9 994 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 IQCEQ6IPM2 695 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 SLC27A1Q6PCB7 646 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 RRAGAQ7L523 313 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 ZNF516Q92618 1163 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 VTI1AQ96AJ9 217 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 RPF1Q9H9Y2 349 aaKnown RBP12.81□□□□□ -0.36
GABRE-202ENST00000417300 IL23AQ9NPF7 189 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 NLRC4Q9NPP4 1024 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 STARD7Q9NQZ5 370 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 PTPRJQ12913 1337 aa12.81□□□□□ -0.36
GABRE-202ENST00000417300 RIF1Q5UIP0 2472 aaKnown RBP12.81□□□□□ -0.36
GABRE-202ENST00000417300 BRWD1Q9NSI6 2320 aa12.8□□□□□ -0.36
GABRE-202ENST00000417300 SOWAHDA6NJG2 315 aa12.8□□□□□ -0.36
GABRE-202ENST00000417300 STAG3L1P0CL83 205 aa12.8□□□□□ -0.36
GABRE-202ENST00000417300 IL9P15248 144 aa12.8□□□□□ -0.36
GABRE-202ENST00000417300 JAM2P57087 298 aa12.8□□□□□ -0.36
GABRE-202ENST00000417300 TRIM71Q2Q1W2 868 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms