RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 PRKCSHP14314 528 aaPredicted RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 CDK11BP21127 795 aaKnown RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 EEF1GP26641 437 aaKnown RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 YARSP54577 528 aaKnown RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 KCNH2Q12809 1159 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 TMEM132DQ14C87 1099 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 ZBTB6Q15916 424 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 MAN2A1Q16706 1144 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 KYAT1Q16773 422 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 NOMO2Q5JPE7 1267 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 RASIP1Q5U651 963 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 TDRD10Q5VZ19 366 aaKnown RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 SPRED2Q7Z698 418 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 ZNF280BQ86YH2 543 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 GPIHBP1Q8IV16 184 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 FAM114A1Q8IWE2 563 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 C1orf127Q8N9H9 656 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 CXorf38Q8TB03 319 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 SEMA4DQ92854 862 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 KHSRPQ92945 711 aaKnown RBP eCLIP8.73□□□□□ -1.014e-6■□□□□ 8.3
MDC1-203ENST00000417033 TOP1MTQ969P6 601 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 PGBD4Q96DM1 585 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 PPP1R10Q96QC0 940 aaKnown RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 FNBP1Q96RU3 617 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 RPS6KC1Q96S38 1066 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 GDF15Q99988 308 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 PAAF1Q9BRP4 392 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 ANP32EQ9BTT0 268 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 TMEM117Q9H0C3 514 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 ELAC1Q9H777 363 aaKnown RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 RC3H2Q9HBD1 1191 aaKnown RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 METTL14Q9HCE5 456 aaKnown RBP8.73□□□□□ -1.01
MDC1-203ENST00000417033 TBC1D13Q9NVG8 400 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 IFNKQ9P0W0 207 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 SIX4Q9UIU6 781 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 LRFN2Q9ULH4 789 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 GIT1Q9Y2X7 761 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.73□□□□□ -1.01
MDC1-203ENST00000417033 CITO14578 2027 aa8.73□□□□□ -1.01
MDC1-203ENST00000417033 LCHNA4D1U4 455 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 PES1O00541 588 aaKnown RBP8.72□□□□□ -1.01
MDC1-203ENST00000417033 INPPL1O15357 1258 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 DGKIO75912 1065 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 IL18RAPO95256 599 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 EOMESO95936 686 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 SKIP12755 728 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 MYOGP15173 224 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 KCNE1P15382 129 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 TNNI1P19237 187 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 PBX3P40426 434 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 KCNJ6P48051 423 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 FMO5P49326 533 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 MXI1P50539 228 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 RABGGTBP53611 331 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 MCCD1P59942 119 aaPredicted RBP8.72□□□□□ -1.01
MDC1-203ENST00000417033 CLDN10P78369 228 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 MYL7Q01449 175 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 VWA3BQ502W6 1294 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 GLB1LQ6UWU2 654 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 C15orf39Q6ZRI6 1047 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 SV2AQ7L0J3 742 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 WDR49Q8IV35 697 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 HACE1Q8IYU2 909 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 TAS1R2Q8TE23 839 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 RNPC3Q96LT9 517 aaKnown RBP8.72□□□□□ -1.01
MDC1-203ENST00000417033 CRACR2AQ9BSW2 395 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 PI4K2AQ9BTU6 479 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 UBE2OQ9C0C9 1292 aaKnown RBP8.72□□□□□ -1.01
MDC1-203ENST00000417033 XPO4Q9C0E2 1151 aaKnown RBP8.72□□□□□ -1.01
MDC1-203ENST00000417033 NDST4Q9H3R1 872 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 ASB7Q9H672 318 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 PLEKHA5Q9HAU0 1116 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 DNAJB4Q9UDY4 337 aa8.72□□□□□ -1.01
MDC1-203ENST00000417033 AJAP1Q9UKB5 411 aaPredicted RBP8.72□□□□□ -1.01
MDC1-203ENST00000417033 MKI67P46013 3256 aaKnown RBP8.72□□□□□ -1.01
MDC1-203ENST00000417033 PDCD11Q14690 1871 aaKnown RBP8.71□□□□□ -1.01
MDC1-203ENST00000417033 A0A1B0GTH6 734 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 GOLGA6L3A6NEY3 463 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 EPHB6O15197 1021 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 EFCAB14O75071 495 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 SERPINC1P01008 464 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 CST3P01034 146 aaPredicted RBP8.71□□□□□ -1.02
MDC1-203ENST00000417033 HLA-DRAP01903 254 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 AFPP02771 609 aaKnown RBP8.71□□□□□ -1.02
MDC1-203ENST00000417033 ITGB3P05106 788 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 ITGB1P05556 798 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 TMEM191BP0C7N4 346 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 ATP2A2P16615 1042 aaKnown RBP8.71□□□□□ -1.02
MDC1-203ENST00000417033 POLR2BP30876 1174 aaKnown RBP8.71□□□□□ -1.02
MDC1-203ENST00000417033 MYL6P60660 151 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 TPM4P67936 248 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 POU5F1Q01860 360 aaKnown RBP8.71□□□□□ -1.02
MDC1-203ENST00000417033 DSC1Q08554 894 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 KCNMA1Q12791 1236 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 LRMPQ12912 555 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 GRIK3Q13003 919 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 BIRC3Q13489 604 aa8.71□□□□□ -1.02
MDC1-203ENST00000417033 ZACNQ401N2 412 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms