RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 RALAP11233 206 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 ALADP13716 330 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 ETS1P14921 441 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 SCP2P22307 547 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 CLDN10P78369 228 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 ADCY1Q08828 1119 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 SLMAPQ14BN4 828 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 E2F5Q15329 346 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 SNCBQ16143 134 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 SGO2Q562F6 1265 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 TDRD10Q5VZ19 366 aaKnown RBP10.52□□□□□ -0.72
SS18-203ENST00000415083 TRMT10CQ7L0Y3 403 aaKnown RBP10.52□□□□□ -0.72
SS18-203ENST00000415083 TEX2Q8IWB9 1127 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 FBXL13Q8NEE6 735 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 GDAP1Q8TB36 358 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 MAGEC3Q8TD91 643 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 MAML1Q92585 1016 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 SCLT1Q96NL6 688 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 FHDC1Q9C0D6 1143 aaPredicted RBP10.52□□□□□ -0.72
SS18-203ENST00000415083 SLC38A10Q9HBR0 1119 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 L3MBTL1Q9Y468 752 aa10.52□□□□□ -0.72
SS18-203ENST00000415083 LOC285556D6RIA3 1793 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 ZSCAN5DPP0CG00 497 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 PSMC4P43686 418 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 VPS41P49754 854 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 FAM182AQ5T1J6 154 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 HIBCHQ6NVY1 386 aaPredicted RBP10.52□□□□□ -0.73
SS18-203ENST00000415083 FAM160B2Q86V87 743 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 CPXCR1Q8N123 301 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 OGFOD1Q8N543 542 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 ZNF341Q9BYN7 854 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 KLHL11Q9NVR0 708 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 NAALADL1Q9UQQ1 740 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 TTLL13PA6NNM8 815 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 TCEA3O75764 348 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 C4BPAP04003 597 aaKnown RBP10.52□□□□□ -0.73
SS18-203ENST00000415083 VIMP08670 466 aaKnown RBP10.52□□□□□ -0.73
SS18-203ENST00000415083 KRT16P08779 473 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 GAD2Q05329 585 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 BNIP1Q12981 228 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 ALCAMQ13740 583 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 TBC1D1Q86TI0 1168 aaPredicted RBP10.52□□□□□ -0.73
SS18-203ENST00000415083 KIRREL3Q8IZU9 778 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 TMEM130Q8N3G9 435 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 KIF2BQ8N4N8 673 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 L3MBTL3Q96JM7 780 aaPredicted RBP10.52□□□□□ -0.73
SS18-203ENST00000415083 SERPINB12Q96P63 405 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 WDR83Q9BRX9 315 aaKnown RBP10.52□□□□□ -0.73
SS18-203ENST00000415083 ROPN1BQ9BZX4 212 aaPredicted RBP10.52□□□□□ -0.73
SS18-203ENST00000415083 KIF9Q9HAQ2 790 aa10.52□□□□□ -0.73
SS18-203ENST00000415083 ROPN1Q9HAT0 212 aaPredicted RBP10.52□□□□□ -0.73
SS18-203ENST00000415083 TAC1P20366 129 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 ATP4AP20648 1035 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 PDE6CP51160 858 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 ALDH5A1P51649 535 aaPredicted RBP10.51□□□□□ -0.73
SS18-203ENST00000415083 NLRP11P59045 1033 aaKnown RBP10.51□□□□□ -0.73
SS18-203ENST00000415083 CENPCQ03188 943 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 XKR9Q5GH70 373 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 PASD1Q8IV76 773 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 TMC2Q8TDI7 906 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 STAMBPL1Q96FJ0 436 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 ZBTB45Q96K62 511 aaPredicted RBP10.51□□□□□ -0.73
SS18-203ENST00000415083 C9orf72Q96LT7 481 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 TEPSINQ96N21 525 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 PDCD2LQ9BRP1 358 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 PXMP2Q9NR77 195 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 MTRF1LQ9UGC7 380 aaKnown RBP10.51□□□□□ -0.73
SS18-203ENST00000415083 TBK1Q9UHD2 729 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 LGALS13Q9UHV8 139 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.51□□□□□ -0.73
SS18-203ENST00000415083 TCRBV5S1A1TA0A578 114 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 SORBS3O60504 671 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 GSTA1P08263 222 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 MAPK4P31152 587 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 OGDHQ02218 1023 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 PPP1R7Q15435 360 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 ECHDC2Q86YB7 292 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 FMNL3Q8IVF7 1028 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 SNF8Q96H20 258 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 FAM213AQ9BRX8 229 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 CCDC113Q9H0I3 377 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 PARP2Q9UGN5 583 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 ANK1P16157 1881 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 H0YIN7 160 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 ITIH2P19823 946 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 HSPA1LP34931 641 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 RDXP35241 583 aaKnown RBP10.51□□□□□ -0.73
SS18-203ENST00000415083 PSMC5P62195 406 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 RPL7AP62424 266 aaKnown RBP10.51□□□□□ -0.73
SS18-203ENST00000415083 FSTL1Q12841 308 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 MAMLD1Q13495 774 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 ZNF268Q14587 947 aaPredicted RBP10.51□□□□□ -0.73
SS18-203ENST00000415083 CLUL1Q15846 466 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 MIS18BP1Q6P0N0 1132 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 SAMD3Q8N6K7 520 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 ANKRD42Q8N9B4 389 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 DENND1AQ8TEH3 1009 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 AGAP11Q8TF27 550 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 P3H4Q92791 437 aa10.51□□□□□ -0.73
SS18-203ENST00000415083 BANF1O75531 89 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms