RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 MRGPREQ86SM8 312 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 CDYL2Q8N8U2 506 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 PGBD4Q96DM1 585 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 CFAP53Q96M91 514 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 DRC1Q96MC2 740 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 THG1LQ9NWX6 298 aaKnown RBP5.74□□□□□ -1.49
PTPRK-209ENST00000415046 ING3Q9NXR8 418 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 DMRT1Q9Y5R6 373 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 C5P01031 1676 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 NCAPD2Q15021 1401 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 IGSF1Q8N6C5 1336 aa5.74□□□□□ -1.49
PTPRK-209ENST00000415046 SEC24DO94855 1032 aaPredicted RBP5.73□□□□□ -1.49
PTPRK-209ENST00000415046 PFKMP08237 780 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 NEK4P51957 841 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 PHC1P78364 1004 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 TKFCQ3LXA3 575 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 SULT6B1Q6IMI4 303 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 ESPNLQ6ZVH7 1005 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 C16orf86Q6ZW13 317 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 RPUSD2Q8IZ73 545 aaKnown RBP5.73□□□□□ -1.49
PTPRK-209ENST00000415046 ZNF276Q8N554 614 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 SMC1BQ8NDV3 1235 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 ZCRB1Q8TBF4 217 aaKnown RBP5.73□□□□□ -1.49
PTPRK-209ENST00000415046 HAS1Q92839 578 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 NINJ1Q92982 152 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 MSRAQ9UJ68 235 aa5.73□□□□□ -1.49
PTPRK-209ENST00000415046 MYBBP1AQ9BQG0 1328 aaKnown RBP5.73□□□□□ -1.49
PTPRK-209ENST00000415046 FOXN1O15353 648 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 RAMP2O60895 175 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 LY86O95711 162 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 KPNA1P52294 538 aaPredicted RBP5.72□□□□□ -1.49
PTPRK-209ENST00000415046 CD69Q07108 199 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 RALBP1Q15311 655 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 FAM214AQ32MH5 1076 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 METTL24Q5JXM2 366 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 PTF1AQ7RTS3 328 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 FERMT2Q96AC1 680 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 ZNF496Q96IT1 587 aaPredicted RBP5.72□□□□□ -1.49
PTPRK-209ENST00000415046 PDCD2LQ9BRP1 358 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 FDXACB1Q9BRP7 624 aaPredicted RBP5.72□□□□□ -1.49
PTPRK-209ENST00000415046 PAPPAQ13219 1627 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 ADAMTS7Q9UKP4 1686 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 PCDH11XQ9BZA7 1347 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 PCDH11YQ9BZA8 1340 aa5.72□□□□□ -1.49
PTPRK-209ENST00000415046 COL5A3P25940 1745 aaPredicted RBP5.71□□□□□ -1.49
PTPRK-209ENST00000415046 MYH14Q7Z406 1995 aaKnown RBP5.71□□□□□ -1.49
PTPRK-209ENST00000415046 UBR3Q6ZT12 1888 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 UBR2Q8IWV8 1755 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 TMEM191CA6NGB0 347 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 HOXA3O43365 443 aaPredicted RBP5.71□□□□□ -1.5
PTPRK-209ENST00000415046 CFBP00751 764 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 U2AF1L5P0DN76 240 aaPredicted RBP5.71□□□□□ -1.5
PTPRK-209ENST00000415046 NR4A1P22736 598 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 GPR15P49685 360 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 WNT3AP56704 352 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 U2AF1Q01081 240 aaKnown RBP eCLIP5.71□□□□□ -1.5
PTPRK-209ENST00000415046 SEPT7Q16181 437 aaKnown RBP5.71□□□□□ -1.5
PTPRK-209ENST00000415046 C21orf62-AS1Q17RA5 79 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 CCDC178Q5BJE1 867 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 ZNF530Q6P9A1 599 aaPredicted RBP5.71□□□□□ -1.5
PTPRK-209ENST00000415046 DEFB132Q7Z7B7 95 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 NIM1KQ8IY84 436 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 PPM1KQ8N3J5 372 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 ZNF610Q8N9Z0 462 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 APPBP2Q92624 585 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 TTPALQ9BTX7 342 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 PRKRIP1Q9H875 184 aaPredicted RBP5.71□□□□□ -1.5
PTPRK-209ENST00000415046 FANCLQ9NW38 375 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 FZD1Q9UP38 647 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 TJP1Q07157 1748 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 QSER1Q2KHR3 1735 aa5.71□□□□□ -1.5
PTPRK-209ENST00000415046 KDM3BQ7LBC6 1761 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 KDRP35968 1356 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 TRIM24O15164 1050 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 ANP32CO43423 234 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 NRP2O60462 931 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 HK1P19367 917 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 NANOS3P60323 173 aaKnown RBP5.7□□□□□ -1.5
PTPRK-209ENST00000415046 OCRLQ01968 901 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 COL10A1Q03692 680 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 PCBP1Q15365 356 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTPRK-209ENST00000415046 PLEKHO1Q53GL0 409 aaPredicted RBP5.7□□□□□ -1.5
PTPRK-209ENST00000415046 CNNM4Q6P4Q7 775 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 LRRC55Q6ZSA7 311 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 SYNE4Q8N205 404 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 OR52N2Q8NGI0 321 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 CPEB1Q9BZB8 566 aaKnown RBP5.7□□□□□ -1.5
PTPRK-209ENST00000415046 NUDCQ9Y266 331 aa5.7□□□□□ -1.5
PTPRK-209ENST00000415046 KDM6AO15550 1401 aaPredicted RBP5.69□□□□□ -1.5
PTPRK-209ENST00000415046 PPFIA4O75335 1185 aa5.69□□□□□ -1.5
PTPRK-209ENST00000415046 ITGB1P05556 798 aa5.69□□□□□ -1.5
PTPRK-209ENST00000415046 PRKAR2BP31323 418 aa5.69□□□□□ -1.5
PTPRK-209ENST00000415046 LSP1P33241 339 aa5.69□□□□□ -1.5
PTPRK-209ENST00000415046 CASRP41180 1078 aa5.69□□□□□ -1.5
PTPRK-209ENST00000415046 LSSP48449 732 aa5.69□□□□□ -1.5
PTPRK-209ENST00000415046 MRPL49Q13405 166 aaKnown RBP5.69□□□□□ -1.5
PTPRK-209ENST00000415046 TERF2Q15554 542 aa5.69□□□□□ -1.5
PTPRK-209ENST00000415046 C1orf141Q5JVX7 400 aa5.69□□□□□ -1.5
PTPRK-209ENST00000415046 LAIR1Q6GTX8 287 aa5.69□□□□□ -1.5
PTPRK-209ENST00000415046 DOK3Q7L591 496 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms