RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 SERPINC1P01008 464 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 CST3P01034 146 aaPredicted RBP14.35□□□□□ -0.11
CNN3-203ENST00000415017 THP07101 528 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 SCNN1GP51170 649 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 ZNF75DP51815 510 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 NOMO2Q5JPE7 1267 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 TCERG1LQ5VWI1 586 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 LMBRD2Q68DH5 695 aaPredicted RBP14.35□□□□□ -0.11
CNN3-203ENST00000415017 EHBP1Q8NDI1 1231 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 FBXL13Q8NEE6 735 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 HELQQ8TDG4 1101 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 TAS1R2Q8TE23 839 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 SEMA4DQ92854 862 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 C18orf25Q96B23 403 aaPredicted RBP14.35□□□□□ -0.11
CNN3-203ENST00000415017 KIF12Q96FN5 646 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 LBHD1Q9BQE6 289 aaPredicted RBP14.35□□□□□ -0.11
CNN3-203ENST00000415017 MTMR12Q9C0I1 747 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 XYLT2Q9H1B5 865 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 PLCB1Q9NQ66 1216 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 TBC1D13Q9NVG8 400 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 DPP3Q9NY33 737 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 ITGA11Q9UKX5 1188 aa14.35□□□□□ -0.11
CNN3-203ENST00000415017 NLRC5Q86WI3 1866 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 CBFA2T2O43439 604 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
CNN3-203ENST00000415017 B4GALT3O60512 393 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 GJB5O95377 273 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 ASS1P00966 412 aaKnown RBP14.34□□□□□ -0.11
CNN3-203ENST00000415017 PON1P27169 355 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 BMP8BP34820 402 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 TUSC3Q13454 348 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 FILIP1LQ4L180 1135 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 GLRA4Q5JXX5 417 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 CD300LGQ6UXG3 332 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 LIMS2Q7Z4I7 341 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 COLGALT2Q8IYK4 626 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 SP7Q8TDD2 431 aaPredicted RBP14.34□□□□□ -0.11
CNN3-203ENST00000415017 FAM212AQ96EL1 285 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 FAXDC2Q96IV6 333 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 ANKRD36BP1Q96IX9 119 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 SLC9A7Q96T83 725 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 PRO3102Q9H379 93 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 SIX2Q9NPC8 291 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 TUBGCP4Q9UGJ1 667 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 FBXL5Q9UKA1 691 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 ITIH6Q6UXX5 1313 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 CHD9Q3L8U1 2897 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 TSC2P49815 1807 aa14.34□□□□□ -0.11
CNN3-203ENST00000415017 ZC3H11AO75152 810 aaKnown RBP eCLIP14.33□□□□□ -0.12
CNN3-203ENST00000415017 LRRN2O75325 713 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 NOL4O94818 638 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 DDHD2O94830 711 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 EFEMP2O95967 443 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 HLA-DRAP01903 254 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 TNNC2P02585 160 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 TPM2P07951 284 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 TMEM191BP0C7N4 346 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 LINC00271P0C7V0 271 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 CDC25BP30305 580 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 RPL9P32969 192 aaKnown RBP14.33□□□□□ -0.12
CNN3-203ENST00000415017 GATMP50440 423 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 TFAMQ00059 246 aaKnown RBP14.33□□□□□ -0.12
CNN3-203ENST00000415017 MYL7Q01449 175 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 UBXN1Q04323 297 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 UPP1Q16831 310 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 FIGNQ5HY92 759 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 C9orf57Q5W0N0 161 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 TRIM65Q6PJ69 517 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 GBP6Q6ZN66 633 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 ZNF280BQ86YH2 543 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 CREBRFQ8IUR6 639 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 VSTM4Q8IW00 320 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 CMTR2Q8IYT2 770 aaKnown RBP14.33□□□□□ -0.12
CNN3-203ENST00000415017 TMEM130Q8N3G9 435 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 LRRC52Q8N7C0 313 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 RNF169Q8NCN4 708 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 BEST2Q8NFU1 509 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 TAF4BQ92750 862 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 UROC1Q96N76 676 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 RPS6KC1Q96S38 1066 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 MRPL9Q9BYD2 267 aaKnown RBP14.33□□□□□ -0.12
CNN3-203ENST00000415017 TRIM5Q9C035 493 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 TTYH3Q9C0H2 523 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 CWH43Q9H720 699 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 RAB20Q9NX57 234 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 LRFN2Q9ULH4 789 aa14.33□□□□□ -0.12
CNN3-203ENST00000415017 TMEM189-UBE2V1I3L0A0 370 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 POMCP01189 267 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 ITGB3P05106 788 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 SLC9A1P19634 815 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 PAX3P23760 479 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 ATICP31939 592 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 KCNJ6P48051 423 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 AARSP49588 968 aaKnown RBP eCLIP14.32□□□□□ -0.12
CNN3-203ENST00000415017 GUCY2FP51841 1108 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 TBX2Q13207 712 aaPredicted RBP14.32□□□□□ -0.12
CNN3-203ENST00000415017 NCOA4Q13772 614 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 EXOC3L4Q17RC7 722 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 C9orf50Q5SZB4 431 aa14.32□□□□□ -0.12
CNN3-203ENST00000415017 FKBP15Q5T1M5 1219 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms