RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 BRD9Q9H8M2 597 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 RRAGCQ9HB90 399 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 AGO4Q9HCK5 861 aaKnown RBP10.05□□□□□ -0.8
SNHG3-201ENST00000413987 TCF7L1Q9HCS4 588 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 PDLIM7Q9NR12 457 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 NYAP2Q9P242 653 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 FAM8A1Q9UBU6 413 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 LAMP5Q9UJQ1 280 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 TRIM17Q9Y577 477 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 GRIN2DO15399 1336 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 STK36Q9NRP7 1315 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 CASQ2O14958 399 aaPredicted RBP10.05□□□□□ -0.8
SNHG3-201ENST00000413987 TEX33O43247 280 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 SMTNP53814 917 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 MAP3K10Q02779 954 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 GTF2H3Q13889 308 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 SEMA3AQ14563 771 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 RASA2Q15283 850 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 SLC14A2Q15849 920 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 EARS2Q5JPH6 523 aaKnown RBP10.05□□□□□ -0.8
SNHG3-201ENST00000413987 POTEEQ6S8J3 1075 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 RNF168Q8IYW5 571 aaPredicted RBP10.05□□□□□ -0.8
SNHG3-201ENST00000413987 PPP1R14CQ8TAE6 165 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 ADAMTS18Q8TE60 1221 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 KCTD10Q9H3F6 313 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 NMRK2Q9NPI5 230 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 ANKRD6Q9Y2G4 727 aa10.05□□□□□ -0.8
SNHG3-201ENST00000413987 LRRC10BA6NIK2 292 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 TRIM75PA6NK02 468 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 SRRM3A6NNA2 597 aaPredicted RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 FRS3O43559 492 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 PPP1R11O60927 126 aaPredicted RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 SCG2P13521 617 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 PRKAR2AP13861 404 aaKnown RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 GCFC2P16383 781 aaKnown RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 MXI1P50539 228 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 CDR1P51861 262 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 TMPRSS15P98073 1019 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 IKQ13123 557 aaPredicted RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 CRYMQ14894 314 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 WLSQ5T9L3 541 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 CNSTQ6PJW8 725 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 RAPH1Q70E73 1250 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 APTXQ7Z2E3 356 aaKnown RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 DIS3L2Q8IYB7 885 aaKnown RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 TRMT44Q8IYL2 757 aaKnown RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 ADGRF4Q8IZF3 695 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 RIN2Q8WYP3 895 aaPredicted RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 NACC2Q96BF6 587 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 COA7Q96BR5 231 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 TRIM11Q96F44 468 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 RUFY1Q96T51 708 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 RUSC1Q9BVN2 902 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 NIFKQ9BYG3 293 aaKnown RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 TNKS2Q9H2K2 1166 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 ZNF304Q9HCX3 659 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 PAPOLBQ9NRJ5 636 aaKnown RBP10.04□□□□□ -0.8
SNHG3-201ENST00000413987 ABHD10Q9NUJ1 306 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 FBXO28Q9NVF7 368 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 UBP1Q9NZI7 540 aa10.04□□□□□ -0.8
SNHG3-201ENST00000413987 CEP350Q5VT06 3117 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 A0A0U1RQJ8 604 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 POTEFA5A3E0 1075 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 MMP1P03956 469 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 GYPCP04921 128 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 GZMAP12544 262 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 P4HA1P13674 534 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 TM4SF4P48230 202 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 MRPL12P52815 198 aaKnown RBP10.03□□□□□ -0.8
SNHG3-201ENST00000413987 KCNC4Q03721 635 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 SPAG1Q07617 926 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 NSUN2Q08J23 767 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNHG3-201ENST00000413987 NPY5RQ15761 445 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 PFKFB3Q16875 520 aaPredicted RBP10.03□□□□□ -0.8
SNHG3-201ENST00000413987 CDKAL1Q5VV42 579 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 EPHX4Q8IUS5 362 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 SPATA20Q8TB22 786 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 MAGEC3Q8TD91 643 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 AENQ8WTP8 325 aaKnown RBP10.03□□□□□ -0.8
SNHG3-201ENST00000413987 KLRG1Q96E93 195 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 CLMNQ96JQ2 1002 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 RMDN2Q96LZ7 410 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 CCDC138Q96M89 665 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 IQCGQ9H095 443 aaKnown RBP10.03□□□□□ -0.8
SNHG3-201ENST00000413987 JMJD4Q9H9V9 463 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 KLC4Q9NSK0 619 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 GPR34Q9UPC5 381 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 DOLKQ9UPQ8 538 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 GOLGA6L7A0A1B0GV03 622 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 H3BRJ5 948 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 WNT7AO00755 349 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 MAFKO60675 156 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 USP2O75604 605 aaPredicted RBP10.03□□□□□ -0.8
SNHG3-201ENST00000413987 ASNSP08243 561 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 ITIH3Q06033 890 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 SPP2Q13103 211 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 FBXL19Q6PCT2 694 aa10.03□□□□□ -0.8
SNHG3-201ENST00000413987 CCDC149Q6ZUS6 474 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms