RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 PI4K2BG5E9Z4 385 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 NFX1Q12986 1120 aaKnown RBP14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 RBM43Q6ZSC3 357 aaKnown RBP14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 USP49Q70CQ1 688 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 TMCO5AQ8N6Q1 288 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 BTBD6Q96KE9 485 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 SENP2Q9HC62 589 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 SUCLA2Q9P2R7 463 aaPredicted RBP14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 CDH16O75309 829 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 PIGHQ14442 188 aaPredicted RBP14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 MORF4L2Q15014 288 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 MAPRE2Q15555 327 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 SNRNP35Q16560 246 aaKnown RBP14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 TRAPPC11Q7Z392 1133 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 ZNF677Q86XU0 584 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 RIT2Q99578 217 aa14.46□□□□□ -0.1
SMARCA4-202ENST00000413806 RPA1P27694 616 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 MXD4Q14582 209 aaPredicted RBP14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 CYFIP1Q7L576 1253 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 ISCUQ9H1K1 167 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 FNDC3AQ9Y2H6 1198 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 TAF6LQ9Y6J9 622 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 KCNQ2O43526 872 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 ADCY3O60266 1144 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 STAT5BP51692 787 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 C18orf8Q96DM3 657 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 PRMT1Q99873 361 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 TRIM51Q9BSJ1 452 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 CFAP69A5D8W1 941 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 MAP4P27816 1152 aaKnown RBP14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 CDC42EP1Q00587 391 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 PTPAQ15257 358 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 C1orf228Q6PIY5 440 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 AGGF1Q8N302 714 aaeCLIP14.45□□□□□ -0.14e-6■■■■□ 20.3
SMARCA4-202ENST00000413806 USP38Q8NB14 1042 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 SGSM3Q96HU1 749 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 TNIP3Q96KP6 325 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 TRIM10Q9UDY6 481 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 ATP11BQ9Y2G3 1177 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 RNF103-CHMP3A0A140T963 221 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 ADORA2BP29275 332 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 RFC5P40937 340 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 SLC10A5Q5PT55 438 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 CDC42EP5Q6NZY7 148 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 DTX3LQ8TDB6 740 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 C10orf88Q9H8K7 445 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 JMJD4Q9H9V9 463 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 GGT7Q9UJ14 662 aa14.45□□□□□ -0.1
SMARCA4-202ENST00000413806 PDE5AO76074 875 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 CHN1P15882 459 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 CENPCQ03188 943 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 KLHDC7AQ5VTJ3 777 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 DACH2Q96NX9 599 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 MAD2L2Q9UI95 211 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 CHMP2BQ9UQN3 213 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 GTPBP10A4D1E9 387 aaKnown RBP14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 PIK3R2O00459 728 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 UBTFL6P0CB48 400 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 PGM1P36871 562 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 ARHGDIAP52565 204 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 EFTUD2Q15029 972 aaKnown RBP eCLIP14.44□□□□□ -0.12e-7■■■■□ 25.9
SMARCA4-202ENST00000413806 SGSM1Q2NKQ1 1148 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 P3H1Q32P28 736 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 MTHFD1LQ6UB35 978 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 URGCPQ8TCY9 931 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 TMEM8AQ9HCN3 771 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 ATF5Q9Y2D1 282 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 TCP11X1B4DZS4 312 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 TYK2P29597 1187 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 PRR5LQ6MZQ0 368 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 ZNF710Q8N1W2 664 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 SEC16BQ96JE7 1060 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 PRR12Q9ULL5 1215 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 PSMD3O43242 534 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 DAB2IPQ5VWQ8 1189 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 XRRA1Q6P2D8 792 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 JAMLQ86YT9 394 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 DNAJC7Q99615 494 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 NOD2Q9HC29 1040 aa14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 PSMC3IPQ9P2W1 217 aaPredicted RBP14.44□□□□□ -0.1
SMARCA4-202ENST00000413806 RAD51CO43502 376 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 RIBC1Q8N443 379 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 ZNF513Q8N8E2 541 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 FLCNQ8NFG4 579 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 HIC2Q96JB3 615 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 CNGB3Q9NQW8 809 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 GPR75-ASB3A0A0A6YYF3 556 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 SERPINB9P50453 376 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 CCNYL1Q8N7R7 359 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 RNF149Q8NC42 400 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 CASP10Q92851 521 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 XPO6Q96QU8 1125 aaKnown RBP14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 RBM15Q96T37 977 aaKnown RBP eCLIP14.43□□□□□ -0.12e-6■■■■□ 21.5
SMARCA4-202ENST00000413806 C19orf81C9J6K1 198 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 SPAG6O75602 509 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 ADCK1Q86TW2 530 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 C2orf69Q8N8R5 385 aa14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 RBBP8NLQ8NC74 664 aaPredicted RBP14.43□□□□□ -0.1
SMARCA4-202ENST00000413806 PARD3BQ8TEW8 1205 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms