RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PTPN2P17706 415 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 PSMA5P28066 241 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 PMLP29590 882 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 CLCNKBP51801 687 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 SRSF5Q13243 272 aaKnown RBP10.54□□□□□ -0.72
RFFL-203ENST00000413582 SIM2Q14190 667 aaPredicted RBP10.54□□□□□ -0.72
RFFL-203ENST00000413582 EARS2Q5JPH6 523 aaKnown RBP10.54□□□□□ -0.72
RFFL-203ENST00000413582 GLRA4Q5JXX5 417 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 EEF1DP3Q658K8 133 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 SLC8B1Q6J4K2 584 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 VITQ6UXI7 678 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 ANKS3Q6ZW76 656 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.54□□□□□ -0.72
RFFL-203ENST00000413582 NOSTRINQ8IVI9 506 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 C3orf58Q8NDZ4 430 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 PIGOQ8TEQ8 1089 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 BSNDQ8WZ55 320 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 IRF7Q92985 503 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 CHAMP1Q96JM3 812 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 CCDC43Q96MW1 224 aaKnown RBP10.54□□□□□ -0.72
RFFL-203ENST00000413582 PPP1R10Q96QC0 940 aaKnown RBP10.54□□□□□ -0.72
RFFL-203ENST00000413582 CORO1BQ9BR76 489 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 TRMT61BQ9BVS5 477 aaKnown RBP10.54□□□□□ -0.72
RFFL-203ENST00000413582 CCDC113Q9H0I3 377 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 LMAN1LQ9HAT1 526 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 ZFP14Q9HCL3 533 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 ZNF334Q9HCZ1 680 aaPredicted RBP10.54□□□□□ -0.72
RFFL-203ENST00000413582 TRPV5Q9NQA5 729 aa10.54□□□□□ -0.72
RFFL-203ENST00000413582 FASNP49327 2511 aaKnown RBP10.54□□□□□ -0.72
RFFL-203ENST00000413582 CHURC1-FNTBB4DL54 471 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 K7ESF4 209 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 ARNTLO00327 626 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 MICAL2O94851 1124 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 ABLIM3O94929 683 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 PAPSS2O95340 614 aaPredicted RBP10.53□□□□□ -0.72
RFFL-203ENST00000413582 PSMC3P17980 439 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 GDI1P31150 447 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 CXCL12P48061 93 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 FNTBP49356 437 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 PRPF4BQ13523 1007 aaKnown RBP10.53□□□□□ -0.72
RFFL-203ENST00000413582 UPP1Q16831 310 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 ZBTB8OSQ8IWT0 167 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 SPEM1Q8N4L4 309 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 ZNF461Q8TAF7 563 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 DEPDC1BQ8WUY9 529 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 ZNF274Q96GC6 653 aaPredicted RBP10.53□□□□□ -0.72
RFFL-203ENST00000413582 ADPGKQ9BRR6 497 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 GOLGA2P5Q9HBQ8 144 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 GJB4Q9NTQ9 266 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 ANGPTL2Q9UKU9 493 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 USP20Q9Y2K6 914 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 GDAQ9Y2T3 454 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 INSL5Q9Y5Q6 135 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 CITO14578 2027 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 STK36Q9NRP7 1315 aa10.53□□□□□ -0.72
RFFL-203ENST00000413582 A0A087WWV3 80 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 PRRG1O14668 218 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 ZNF197O14709 1029 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 FOXD2O60548 495 aaPredicted RBP10.52□□□□□ -0.73
RFFL-203ENST00000413582 MOSPD3O75425 235 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.73
RFFL-203ENST00000413582 SEC24AO95486 1093 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 PRKCBP05771 671 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 ATF2P15336 505 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 VIPR2P41587 438 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 BRCC3P46736 316 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 SHC2P98077 582 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 SOX4Q06945 474 aaPredicted RBP10.52□□□□□ -0.73
RFFL-203ENST00000413582 STK3Q13188 491 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 PTGDRQ13258 359 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 MAPK6Q16659 721 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 TMEM132AQ24JP5 1023 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 DCAF4L1Q3SXM0 396 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 WDR44Q5JSH3 913 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 CPLX2Q6PUV4 134 aaKnown RBP10.52□□□□□ -0.73
RFFL-203ENST00000413582 Q6ZS52 159 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 PDZD4Q76G19 769 aaPredicted RBP10.52□□□□□ -0.73
RFFL-203ENST00000413582 RUFY3Q7L099 469 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 MAEAQ7L5Y9 396 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 TCEAL8Q8IYN2 117 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 MCPH1Q8NEM0 835 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 DDX1Q92499 740 aaKnown RBP10.52□□□□□ -0.73
RFFL-203ENST00000413582 SMARCD2Q92925 531 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 TNFRSF25Q93038 417 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 ZSWIM3Q96MP5 696 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 UROC1Q96N76 676 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 LARP6Q9BRS8 491 aaKnown RBP10.52□□□□□ -0.73
RFFL-203ENST00000413582 C2orf40Q9H1Z8 148 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 TRPV4Q9HBA0 871 aa10.52□□□□□ -0.73
RFFL-203ENST00000413582 RALYQ9UKM9 306 aaKnown RBP10.52□□□□□ -0.73
RFFL-203ENST00000413582 NUP210Q8TEM1 1887 aaPredicted RBP10.51□□□□□ -0.73
RFFL-203ENST00000413582 ACKR2O00590 384 aa10.51□□□□□ -0.73
RFFL-203ENST00000413582 TRAPPC3O43617 180 aa10.51□□□□□ -0.73
RFFL-203ENST00000413582 CCNE1P24864 410 aa10.51□□□□□ -0.73
RFFL-203ENST00000413582 ELF1P32519 619 aa10.51□□□□□ -0.73
RFFL-203ENST00000413582 CNR2P34972 360 aa10.51□□□□□ -0.73
RFFL-203ENST00000413582 LIMK1P53667 647 aa10.51□□□□□ -0.73
RFFL-203ENST00000413582 EPHA5P54756 1037 aa10.51□□□□□ -0.73
RFFL-203ENST00000413582 MLLT6P55198 1093 aaPredicted RBP10.51□□□□□ -0.73
RFFL-203ENST00000413582 NR5A1Q13285 461 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms