RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 MPZL3Q6UWV2 235 aa26.27■■□□□ 1.8
VRK2-202ENST00000412104 TSHZ1Q6ZSZ6 1077 aa26.27■■□□□ 1.8
VRK2-202ENST00000412104 FZD8Q9H461 694 aa26.27■■□□□ 1.8
VRK2-202ENST00000412104 VTA1Q9NP79 307 aa26.27■■□□□ 1.8
VRK2-202ENST00000412104 ZSWIM8A7E2V4 1837 aa26.26■■□□□ 1.8
VRK2-202ENST00000412104 EVPLQ92817 2033 aa26.26■■□□□ 1.8
VRK2-202ENST00000412104 ACKR2O00590 384 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 RNF40O75150 1001 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 CYP1A1P04798 512 aaPredicted RBP26.26■■□□□ 1.79
VRK2-202ENST00000412104 LGALS2P05162 132 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 PEX5P50542 639 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 GTF2A2P52657 109 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 MCOLN2Q8IZK6 566 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 CCDC26Q8TAB7 109 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 UBE2Q2Q8WVN8 375 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 RIN2Q8WYP3 895 aaPredicted RBP26.26■■□□□ 1.79
VRK2-202ENST00000412104 IMPG2Q9BZV3 1241 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 MTMR12Q9C0I1 747 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 CNTN6Q9UQ52 1028 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 INO80B-WBP1J3KQ70 363 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 GPR162Q16538 588 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 ATF7IP2Q5U623 682 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 AADACL2Q6P093 401 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 CPNE8Q86YQ8 564 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 EIF1ADQ8N9N8 165 aaKnown RBP26.26■■□□□ 1.79
VRK2-202ENST00000412104 RBBP8NLQ8NC74 664 aaPredicted RBP26.26■■□□□ 1.79
VRK2-202ENST00000412104 CPA5Q8WXQ8 436 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 BRI3BPQ8WY22 251 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 FAM212AQ96EL1 285 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 INO80BQ9C086 356 aaPredicted RBP26.26■■□□□ 1.79
VRK2-202ENST00000412104 PTPRHQ9HD43 1115 aa26.26■■□□□ 1.79
VRK2-202ENST00000412104 GOLGA6L10A0A0M3HER8 536 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 B4GALT5O43286 388 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 SPOPO43791 374 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 ASS1P00966 412 aaKnown RBP26.25■■□□□ 1.79
VRK2-202ENST00000412104 GH1P01241 217 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 GNA15P30679 374 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 CTNNA1P35221 906 aaKnown RBP26.25■■□□□ 1.79
VRK2-202ENST00000412104 PTENP60484 403 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 POU5F1Q01860 360 aaKnown RBP26.25■■□□□ 1.79
VRK2-202ENST00000412104 CENPCQ03188 943 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 MBTD1Q05BQ5 628 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 CUL1Q13616 776 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 MAMDC4Q6UXC1 1216 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 MAATS1Q7Z4T9 603 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 ADAT2Q7Z6V5 191 aaKnown RBP26.25■■□□□ 1.79
VRK2-202ENST00000412104 WHAMMQ8TF30 809 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 AVENQ9NQS1 362 aaPredicted RBP26.25■■□□□ 1.79
VRK2-202ENST00000412104 SRCAPQ6ZRS2 3230 aa26.25■■□□□ 1.79
VRK2-202ENST00000412104 CST3P01034 146 aaPredicted RBP26.24■■□□□ 1.79
VRK2-202ENST00000412104 ECHS1P30084 290 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 GUCY2FP51841 1108 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 IGBP1P78318 339 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 SURF1Q15526 300 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 ZNF568Q3ZCX4 644 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 ABRAQ8N0Z2 381 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP26.24■■□□□ 1.79
VRK2-202ENST00000412104 TRIM11Q96F44 468 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 ERVK-5Q9HDB9 667 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.24■■□□□ 1.79
VRK2-202ENST00000412104 ANK1P16157 1881 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 ASAP2O43150 1006 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 TTI1O43156 1089 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 MYBL1P10243 752 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 INSRRP14616 1297 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 CTNNA2P26232 953 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 NSFP46459 744 aaKnown RBP26.24■■□□□ 1.79
VRK2-202ENST00000412104 ZNF484Q5JVG2 852 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 CYFIP2Q96F07 1278 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 CELF4Q9BZC1 486 aaKnown RBP26.24■■□□□ 1.79
VRK2-202ENST00000412104 MINDY3Q9H8M7 445 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 MORF4L1Q9UBU8 362 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 IVNS1ABPQ9Y6Y0 642 aa26.24■■□□□ 1.79
VRK2-202ENST00000412104 RBM47A0AV96 593 aaKnown RBP26.23■■□□□ 1.79
VRK2-202ENST00000412104 CCDC66A2RUB6 948 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 CFHP08603 1231 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 HOXC6P09630 235 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 GCLCP48506 637 aaPredicted RBP26.23■■□□□ 1.79
VRK2-202ENST00000412104 TRIM72Q6ZMU5 477 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 ANKRD23Q86SG2 305 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 THNSL1Q8IYQ7 743 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 MREGQ8N565 214 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 UBR7Q8N806 425 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 PPTC7Q8NI37 304 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 EXOC4Q96A65 974 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 KATNBL1Q9H079 304 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.23■■□□□ 1.79
VRK2-202ENST00000412104 ANAPC7Q9UJX3 599 aa26.23■■□□□ 1.79
VRK2-202ENST00000412104 STRNO43815 780 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 RRM1P23921 792 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 CYP2C19P33261 490 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 HLTFQ14527 1009 aaKnown RBP eCLIP26.22■■□□□ 1.79
VRK2-202ENST00000412104 PPP2R5EQ16537 467 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 DUOXA2Q1HG44 320 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 TMEM132AQ24JP5 1023 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 SEL1L2Q5TEA6 688 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 ALS2CLQ60I27 953 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 EEF1DP3Q658K8 133 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 MON1BQ7L1V2 547 aa26.22■■□□□ 1.79
VRK2-202ENST00000412104 ZNF467Q7Z7K2 595 aaPredicted RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms