RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ELMO1Q92556 727 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 CLPTM1LQ96KA5 538 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 NOC4LQ9BVI4 516 aaKnown RBP4.81□□□□□ -1.64
PTPN13-202ENST00000411767 YTHDF1Q9BYJ9 559 aaKnown RBP4.81□□□□□ -1.64
PTPN13-202ENST00000411767 GCOM2Q9BZD3 368 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-202ENST00000411767 RGS18Q9NS28 235 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 RCOR1Q9UKL0 485 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 SMIM22K7EJ46 135 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 BMP10O95393 424 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ACLYP53396 1101 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 MFAP3P55082 362 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ABATP80404 500 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 HDLBPQ00341 1268 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ZSWIM7Q19AV6 140 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 FAM199XQ6PEV8 388 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SMARCD3Q6STE5 483 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RCOR2Q8IZ40 523 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 DNAAF1Q8NEP3 725 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 EEF1AKMT1Q8WVE0 214 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SNRNP27Q8WVK2 155 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RAD54LQ92698 747 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 YIPF2Q9BWQ6 316 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SLC4A5Q9BY07 1137 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ATXN3LQ9H3M9 355 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 MOB1AQ9H8S9 216 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SLC25A13Q9UJS0 675 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PEX14O75381 377 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ATP2B4P23634 1241 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ATP5F1P24539 256 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PUM1Q14671 1186 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 UGP2Q16851 508 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ZCCHC8Q6NZY4 707 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 MTHFD1LQ6UB35 978 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CCDC81Q6ZN84 652 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 OOSP2Q86WS3 158 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PDCD6IPQ8WUM4 868 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CAVIN3Q969G5 261 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ARL15Q9NXU5 204 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF175Q9Y473 711 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 IRAK3Q9Y616 596 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 A0A087X0T9 212 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 BORCS7-ASMTA0A0B4J1R7 106 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF862O60290 1169 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PTCD1O75127 700 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 H2AFYO75367 372 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 HCKP08631 526 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CD19P15391 556 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ITIH1P19827 911 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ARL4AP40617 200 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 TAF13Q15543 124 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ARSJQ5FYB0 599 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 TMEM67Q5HYA8 995 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 MFSD6Q6ZSS7 791 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SIX5Q8N196 739 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CLEC4FQ8N1N0 589 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PIK3C3Q8NEB9 887 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 BORCS7Q96B45 105 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PTCHD1Q96NR3 888 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 MROH8Q9H579 483 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SMAPO00193 183 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ZMPSTE24O75844 475 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 NFICP08651 508 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ANXA13P27216 316 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 HNRNPH1P31943 449 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 RGS4P49798 205 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 NAPAP54920 295 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PSMC5P62195 406 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CNTN1Q12860 1018 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ABCB5Q2M3G0 1257 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 IZUMO3Q5VZ72 239 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF57Q68EA5 555 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 C4orf22Q6V702 233 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 HEATR4Q86WZ0 1026 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 AGGF1Q8N302 714 aaeCLIP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CCNYQ8ND76 341 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 FAM167BQ9BTA0 163 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 POLR1BQ9H9Y6 1135 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF112Q9UJU3 913 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 IVNS1ABPQ9Y6Y0 642 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 NUAK1O60285 661 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PPM1BO75688 479 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ABL1P00519 1130 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 GCFC2P16383 781 aaKnown RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ATF6P18850 670 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SLC16A1P53985 500 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 CSNK2BP67870 215 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ALG11Q2TAA5 492 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 FBXW10Q5XX13 1052 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SCYL2Q6P3W7 929 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 SETD3Q86TU7 594 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 PROSER1Q86XN7 944 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 GPALPP1Q8IXQ4 340 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 GRAMD1CQ8IYS0 662 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 TTC30BQ8N4P2 665 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 DNAAF3Q8N9W5 541 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 KBTBD7Q8WVZ9 684 aa4.8□□□□□ -1.64
PTPN13-202ENST00000411767 DNAJA4Q8WW22 397 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 USP13Q92995 863 aaPredicted RBP4.8□□□□□ -1.64
PTPN13-202ENST00000411767 ARHGEF26Q96DR7 871 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms