RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PXMP2Q9NR77 195 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 C1orf112Q9NSG2 853 aa17.77■□□□□ 0.44
LIMS2-208ENST00000410011 CDH16O75309 829 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 STBD1O95210 358 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 EIF2AK2P19525 551 aaKnown RBP17.77■□□□□ 0.43
LIMS2-208ENST00000410011 RRM1P23921 792 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 ZNF268Q14587 947 aaPredicted RBP17.77■□□□□ 0.43
LIMS2-208ENST00000410011 STAT4Q14765 748 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 MON1BQ7L1V2 547 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 KATNAL2Q8IYT4 538 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 RIBC1Q8N443 379 aaPredicted RBP17.77■□□□□ 0.43
LIMS2-208ENST00000410011 DYDC1Q8WWB3 177 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 BSNDQ8WZ55 320 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 GPRASP2Q96D09 838 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 CCDC113Q9H0I3 377 aa17.77■□□□□ 0.43
LIMS2-208ENST00000410011 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.77■□□□□ 0.43
LIMS2-208ENST00000410011 C21orf2O43822 256 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 DGAT1O75907 488 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 GJB6O95452 261 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 ABHD2P08910 425 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 NSFP46459 744 aaKnown RBP17.76■□□□□ 0.43
LIMS2-208ENST00000410011 IFNAR2P48551 515 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 SNX1Q13596 522 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 CCDC38Q502W7 563 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 RHOT1Q8IXI2 618 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 SCLT1Q96NL6 688 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 RMDN3Q96TC7 470 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 CCDC77Q9BR77 488 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 MRPL47Q9HD33 250 aaKnown RBP17.76■□□□□ 0.43
LIMS2-208ENST00000410011 NINJ2Q9NZG7 142 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 ADGRA3Q8IWK6 1321 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 UMODL1Q5DID0 1318 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 THAP12O43422 761 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 EXTL3O43909 919 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 ATP2C2O75185 946 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 ADCY8P40145 1251 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 LMNB2Q03252 620 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 PSMD6Q15008 389 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 KYNUQ16719 465 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 ZACNQ401N2 412 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 HIBCHQ6NVY1 386 aaPredicted RBP17.76■□□□□ 0.43
LIMS2-208ENST00000410011 ARHGEF18Q6ZSZ5 1173 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 CDAN1Q8IWY9 1227 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 EXD1Q8NHP7 514 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 ATP6V0A1Q93050 837 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 ZBED3Q96IU2 234 aaPredicted RBP17.76■□□□□ 0.43
LIMS2-208ENST00000410011 HERPUD2Q9BSE4 406 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 KIFC3Q9BVG8 833 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 RAVER2Q9HCJ3 691 aaKnown RBP17.76■□□□□ 0.43
LIMS2-208ENST00000410011 EURLQ9NYK6 297 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 ARHGAP28Q9P2N2 729 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 PRKAG3Q9UGI9 489 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 MCM8Q9UJA3 840 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 STYXL1Q9Y6J8 313 aa17.76■□□□□ 0.43
LIMS2-208ENST00000410011 NFASCO94856 1347 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 TCP11X1B4DZS4 312 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 ATP6V1G2O95670 118 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 WDR44Q5JSH3 913 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 LIN9Q5TKA1 542 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-208ENST00000410011 CCHCR1Q8TD31 782 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 ATG4AQ8WYN0 398 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 ZNF516Q92618 1163 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 GRAMD1AQ96CP6 724 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 CEP170P1Q96L14 293 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 VEZTQ9HBM0 779 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 CNTN6Q9UQ52 1028 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 ARL2BPQ9Y2Y0 163 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 HNRNPDLO14979 420 aaKnown RBP17.75■□□□□ 0.43
LIMS2-208ENST00000410011 C4BPAP04003 597 aaKnown RBP17.75■□□□□ 0.43
LIMS2-208ENST00000410011 IRX3P78415 501 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-208ENST00000410011 BNIP1Q12981 228 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 PLEKHA7Q6IQ23 1121 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 DRICH1Q6PGQ1 229 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-208ENST00000410011 PPP1R21Q6ZMI0 780 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 VSIG10LQ86VR7 867 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 PHF13Q86YI8 300 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-208ENST00000410011 CPXCR1Q8N123 301 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 AGBL3Q8NEM8 1001 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 MAGEB18Q96M61 343 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 VPS33BQ9H267 617 aa17.75■□□□□ 0.43
LIMS2-208ENST00000410011 EP400Q96L91 3159 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 A0A1B0GUA9 196 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 RALAP11233 206 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 MYCLP12524 364 aaPredicted RBP17.74■□□□□ 0.43
LIMS2-208ENST00000410011 BRAFP15056 766 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 EZRP15311 586 aaKnown RBP17.74■□□□□ 0.43
LIMS2-208ENST00000410011 SLC18A1P54219 525 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 NLRX1Q86UT6 975 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 RTKN2Q8IZC4 609 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 CPA5Q8WXQ8 436 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 TRIM7Q9C029 511 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 ABCF3Q9NUQ8 709 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 FGFR1OP2Q9NVK5 253 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 SCINQ9Y6U3 715 aa17.74■□□□□ 0.43
LIMS2-208ENST00000410011 CREB1P16220 341 aa17.73■□□□□ 0.43
LIMS2-208ENST00000410011 ACO1P21399 889 aaKnown RBP17.73■□□□□ 0.43
LIMS2-208ENST00000410011 KLRC2P26717 231 aa17.73■□□□□ 0.43
LIMS2-208ENST00000410011 NR1H3Q13133 447 aa17.73■□□□□ 0.43
LIMS2-208ENST00000410011 ARHGEF16Q5VV41 709 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms