RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 GTF2F1P35269 517 aaKnown RBP eCLIP24.27■■□□□ 1.48
PTCD3-203ENST00000409783 CYP2J2P51589 502 aa24.27■■□□□ 1.48
PTCD3-203ENST00000409783 TMEM132DQ14C87 1099 aa24.27■■□□□ 1.48
PTCD3-203ENST00000409783 SLC9A9Q8IVB4 645 aa24.27■■□□□ 1.48
PTCD3-203ENST00000409783 XXYLT1Q8NBI6 393 aa24.27■■□□□ 1.48
PTCD3-203ENST00000409783 GOLGA5Q8TBA6 731 aa24.27■■□□□ 1.48
PTCD3-203ENST00000409783 KIAA1586Q9HCI6 787 aa24.27■■□□□ 1.48
PTCD3-203ENST00000409783 ZNF233A6NK53 670 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 B3GAT3O94766 335 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 CXCL14O95715 111 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 BMP6P22004 513 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 PRCPP42785 496 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 SMC1AQ14683 1233 aaKnown RBP24.26■■□□□ 1.47
PTCD3-203ENST00000409783 PTPN14Q15678 1187 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 ZCWPW2Q504Y3 356 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 KIAA0319Q5VV43 1072 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 PDE11AQ9HCR9 933 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 PRDM6Q9NQX0 595 aa24.26■■□□□ 1.47
PTCD3-203ENST00000409783 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.26■■□□□ 1.47
PTCD3-203ENST00000409783 SNRNP35Q16560 246 aaKnown RBP24.25■■□□□ 1.47
PTCD3-203ENST00000409783 CAMK4Q16566 473 aa24.25■■□□□ 1.47
PTCD3-203ENST00000409783 NT5DC4Q86YG4 428 aa24.25■■□□□ 1.47
PTCD3-203ENST00000409783 NOC3LQ8WTT2 800 aaKnown RBP24.25■■□□□ 1.47
PTCD3-203ENST00000409783 B3GALT6Q96L58 329 aa24.25■■□□□ 1.47
PTCD3-203ENST00000409783 SF3B1O75533 1304 aaKnown RBP eCLIP24.25■■□□□ 1.474e-7■■■■■ 86.2
PTCD3-203ENST00000409783 SCN1AP35498 2009 aa24.25■■□□□ 1.47
PTCD3-203ENST00000409783 PPEF2O14830 753 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 XPOTO43592 962 aaKnown RBP24.24■■□□□ 1.47
PTCD3-203ENST00000409783 NR3C1P04150 777 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 BRCC3P46736 316 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 NRIP1P48552 1158 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 DSG1Q02413 1049 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 MORC3Q14149 939 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 NFIL3Q16649 462 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 CTC1Q2NKJ3 1217 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 ISM2Q6H9L7 571 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 ADSSL1Q8N142 457 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 RDH13Q8NBN7 331 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 BEST2Q8NFU1 509 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 FAM84AQ96KN4 292 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 GZF1Q9H116 711 aaPredicted RBP24.24■■□□□ 1.47
PTCD3-203ENST00000409783 CLSTN2Q9H4D0 955 aa24.24■■□□□ 1.47
PTCD3-203ENST00000409783 ANO9A1A5B4 782 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 PER2O15055 1255 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 GLUD2P49448 558 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 MYBPC2Q14324 1141 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 DUSP6Q16828 381 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 USP41Q3LFD5 358 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 RBM23Q86U06 439 aaKnown RBP24.23■■□□□ 1.47
PTCD3-203ENST00000409783 GPR65Q8IYL9 337 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 GPT2Q8TD30 523 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 MFSD14AQ96MC6 490 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 GTPBP4Q9BZE4 634 aaKnown RBP24.23■■□□□ 1.47
PTCD3-203ENST00000409783 TLE6Q9H808 572 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 KIAA1468Q9P260 1216 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 PTPRJQ12913 1337 aa24.23■■□□□ 1.47
PTCD3-203ENST00000409783 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.22■■□□□ 1.47
PTCD3-203ENST00000409783 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.22■■□□□ 1.47
PTCD3-203ENST00000409783 I3L4J1 428 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 PIRO00625 290 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 CALUO43852 315 aaPredicted RBP24.22■■□□□ 1.47
PTCD3-203ENST00000409783 EXOC3O60645 756 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 CD44P16070 742 aaKnown RBP24.22■■□□□ 1.47
PTCD3-203ENST00000409783 FGFR3P22607 806 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 CASP4P49662 377 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 CYP24A1Q07973 514 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 ELAVL2Q12926 359 aaKnown RBP24.22■■□□□ 1.47
PTCD3-203ENST00000409783 KCNC3Q14003 757 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 RTP2Q5QGT7 225 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 FAM171A1Q5VUB5 890 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 C9orf57Q5W0N0 161 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 CENPPQ6IPU0 288 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 CXorf38Q8TB03 319 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 PLEKHO2Q8TD55 490 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 PPP2R3CQ969Q6 453 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 IGFLR1Q9H665 355 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 RXFP1Q9HBX9 757 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 MRPL17Q9NRX2 175 aaKnown RBP24.22■■□□□ 1.47
PTCD3-203ENST00000409783 DPP3Q9NY33 737 aa24.22■■□□□ 1.47
PTCD3-203ENST00000409783 SPTBN5Q9NRC6 3674 aaKnown RBP24.21■■□□□ 1.47
PTCD3-203ENST00000409783 BIN1O00499 593 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 LINC01565O15544 149 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 URODP06132 367 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 LTBRP36941 435 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 AARSP49588 968 aaKnown RBP eCLIP24.21■■□□□ 1.47
PTCD3-203ENST00000409783 ADAM15Q13444 863 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 BMS1Q14692 1282 aaKnown RBP24.21■■□□□ 1.47
PTCD3-203ENST00000409783 PSMD6Q15008 389 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 SURF1Q15526 300 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 SCARA3Q6AZY7 606 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 EFHBQ8N7U6 833 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 VN1R2Q8NFZ6 395 aa24.21■■□□□ 1.47
PTCD3-203ENST00000409783 PABPC5Q96DU9 382 aaKnown RBP24.21■■□□□ 1.47
PTCD3-203ENST00000409783 CDCA3Q99618 268 aaPredicted RBP24.21■■□□□ 1.47
PTCD3-203ENST00000409783 GOLGA6L22H0YM25 854 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 C2CD2LO14523 706 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 CLASP2O75122 1294 aaKnown RBP24.2■■□□□ 1.46
PTCD3-203ENST00000409783 GLP2RO95838 553 aa24.2■■□□□ 1.46
PTCD3-203ENST00000409783 CNPP09543 421 aaKnown RBP24.2■■□□□ 1.46
PTCD3-203ENST00000409783 PMS1P54277 932 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms