RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 MMS22LQ6ZRQ5 1243 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 COG1Q8WTW3 980 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 TNIP3Q96KP6 325 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 MCEEQ96PE7 176 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 SCOCQ9UIL1 159 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 hCG_2014768A0A024R1R8 64 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 POMCP01189 267 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 LMNAP02545 664 aaKnown RBP8.85□□□□□ -0.99
SCN9A-203ENST00000409672 ARL4CP56559 192 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 C16orf87Q6PH81 154 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 CYP26B1Q9NR63 512 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 TBC1D22BQ9NU19 505 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.85□□□□□ -0.99
SCN9A-203ENST00000409672 GYG2O15488 501 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 EPHX2P34913 555 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 NR1H3Q13133 447 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 GOLGA7BQ2TAP0 167 aa8.85□□□□□ -0.99
SCN9A-203ENST00000409672 ALKBH5Q6P6C2 394 aaKnown RBP8.85□□□□□ -0.99
SCN9A-203ENST00000409672 TADA3O75528 432 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 RPS6P62753 249 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 GPC5P78333 572 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 MIIPQ5JXC2 388 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 SHCBP1Q8NEM2 672 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 TRIM62Q9BVG3 475 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 DGKIO75912 1065 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 P4HBP07237 508 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 CSF1RP07333 972 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 GUCY1A2P33402 732 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 LRRC36Q1X8D7 754 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 CERKQ8TCT0 537 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 GPT2Q8TD30 523 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 ZNF560Q96MR9 790 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 PIF1Q9H611 641 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 CERS4Q9HA82 394 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 ANKRD65E5RJM6 399 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 RNASEH1O60930 286 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 ARSEP51690 589 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 HSP90AA5PQ58FG0 334 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 PITPNM3Q9BZ71 974 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 TUT1Q9H6E5 874 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 MOXD2PA6NHM9 499 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 TMEM132BQ14DG7 1078 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 C1orf146Q5VVC0 180 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 ARMC2Q8NEN0 867 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 DIS3LQ8TF46 1054 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 SCFD1Q8WVM8 642 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 LSG1Q9H089 658 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 DEFB129Q9H1M3 183 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 PPP6R2O75170 966 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 CETPP11597 493 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 KRT76Q01546 638 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 SNAP47Q5SQN1 464 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 NSUN7Q8NE18 718 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 FBXO41Q8TF61 875 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 CHST12Q9NRB3 414 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 FAM32AQ9Y421 112 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 SNX8Q9Y5X2 465 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 SH3BGRLO75368 114 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 PRR29P0C7W0 189 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 PRCPP42785 496 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 TRIM60Q495X7 471 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 ARHGEF25Q86VW2 580 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 BLOC1S5Q8TDH9 187 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 CSGALNACT1Q8TDX6 532 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 IQCDQ96DY2 449 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 CUEDC2Q9H467 287 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 CALB1P05937 261 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 GYS2P54840 703 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 NME5P56597 212 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 MAP1SQ66K74 1059 aaPredicted RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 CINPQ9BW66 212 aaPredicted RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 MOV10L1Q9BXT6 1211 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 C20orf96Q9NUD7 363 aaPredicted RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 EEF2KO00418 725 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 PRPF3O43395 683 aaKnown RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 ALDH9A1P49189 494 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 LAYNQ6UX15 382 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 SSH3Q8TE77 659 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 MARCOQ9UEW3 520 aaPredicted RBP8.84□□□□□ -0.99
SCN9A-203ENST00000409672 SNX5Q9Y5X3 404 aa8.84□□□□□ -0.99
SCN9A-203ENST00000409672 NDUFS2O75306 463 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PMPCBO75439 489 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 SCNN1BP51168 640 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 BEND6Q5SZJ8 279 aaPredicted RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 ZNF438Q7Z4V0 828 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 SYT2Q8N9I0 419 aaPredicted RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 ASAP3Q8TDY4 903 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 HAUS4Q9H6D7 363 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 KPNA7A9QM74 516 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 CARSP49589 748 aaKnown RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 STARD3Q14849 445 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 TBC1D10CQ8IV04 446 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 FBXO16Q8IX29 292 aaPredicted RBP8.83□□□□□ -1
SCN9A-203ENST00000409672 FLCNQ8NFG4 579 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PTPRN2Q92932 1015 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 PBKQ96KB5 322 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 LRRC37BQ96QE4 947 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 IP6K2Q9UHH9 426 aa8.83□□□□□ -1
SCN9A-203ENST00000409672 A0A087X0T9 212 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms