RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 HOXA2O43364 376 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 ITGB3P05106 788 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 COPB1P53618 953 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 TPM4P67936 248 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 GRIK3Q13003 919 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 ZBTB6Q15916 424 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 MAN2A1Q16706 1144 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 SV2AQ7L0J3 742 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 APTXQ7Z2E3 356 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 ANKRD36BP1Q96IX9 119 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 FAM193BQ96PV7 902 aaPredicted RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 CRACR2AQ9BSW2 395 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 PI4K2AQ9BTU6 479 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 RC3H2Q9HBD1 1191 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 PRG3Q9Y2Y8 225 aaPredicted RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 MRPL42Q9Y6G3 142 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 AP5Z1O43299 807 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 PHACTR2O75167 634 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 VNN1O95497 513 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 SERPINC1P01008 464 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 CST3P01034 146 aaPredicted RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 TNNC2P02585 160 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 C4BPAP04003 597 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 EEF1GP26641 437 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 POLR2BP30876 1174 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 DEKP35659 375 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 OR1G1P47890 313 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 FMO5P49326 533 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 MRE11P49959 708 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 CLCNKBP51801 687 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 FANCCQ00597 558 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 APBA1Q02410 837 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 DUOXA2Q1HG44 320 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 VWA3BQ502W6 1294 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 TRAPPC11Q7Z392 1133 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 CD302Q8IX05 232 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 LRRC43Q8N309 656 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 NAP1L5Q96NT1 182 aaPredicted RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 LIMA1Q9UHB6 759 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 SIX4Q9UIU6 781 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 UBQLN1Q9UMX0 589 aaKnown RBP15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 C2CD2Q9Y426 696 aa15.24■□□□□ 0.03
CHRNA1-204ENST00000409323 TEX33O43247 280 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 AFPP02771 609 aaKnown RBP15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 ITGB1P05556 798 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 MXI1P50539 228 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 CLDN10P78369 228 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 MYL7Q01449 175 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 SURF1Q15526 300 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 COLGALT2Q8IYK4 626 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 TDHQ8IZJ6 230 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 C3orf58Q8NDZ4 430 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 TAS1R2Q8TE23 839 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 SEMA4DQ92854 862 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 NDST4Q9H3R1 872 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 CWH43Q9H720 699 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 MTUS1Q9ULD2 1270 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 AGAP1Q9UPQ3 857 aa15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 YBX2Q9Y2T7 364 aaKnown RBP15.23■□□□□ 0.03
CHRNA1-204ENST00000409323 LAMA3Q16787 3333 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 I3L4J1 428 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 INPPL1O15357 1258 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 CSPG5O95196 566 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 HLA-DRAP01903 254 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 PIK3CAP42336 1068 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 SLC11A1P49279 550 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 KLK7P49862 253 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 BCAR1P56945 870 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 HTRA4P83105 476 aaPredicted RBP15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 DSC1Q08554 894 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 LRMPQ12912 555 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 TUSC3Q13454 348 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 HSP90AA2PQ14568 343 aaPredicted RBP15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 SPOPLQ6IQ16 392 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 USP37Q86T82 979 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 TMEM173Q86WV6 379 aaPredicted RBP15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 ANKRD20A12PQ8NF67 263 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 PHOSPHO2Q8TCD6 241 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 CACTINQ8WUQ7 758 aaKnown RBP15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 RAD9AQ99638 391 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 TMEM8AQ9HCN3 771 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 RNF216Q9NWF9 866 aaPredicted RBP15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 IFNKQ9P0W0 207 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 INSL6Q9Y581 213 aa15.22■□□□□ 0.03
CHRNA1-204ENST00000409323 PODXLO00592 558 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 CA3P07451 260 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 BMP8BP34820 402 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 MYL6P60660 151 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 POU5F1Q01860 360 aaKnown RBP15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 ZACNQ401N2 412 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 C9orf57Q5W0N0 161 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 KRT39Q6A163 491 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 C15orf39Q6ZRI6 1047 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 CMTR2Q8IYT2 770 aaKnown RBP15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 CXorf38Q8TB03 319 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 MRPL9Q9BYD2 267 aaKnown RBP15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 CERS4Q9HA82 394 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 GRPEL1Q9HAV7 217 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms