RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CASP10Q92851 521 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 MPP4Q96JB8 637 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 BLOC1S6Q9UL45 172 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 GSTT1P30711 240 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 BCAR1P56945 870 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 GTF3C4Q9UKN8 822 aa18.6■□□□□ 0.57
SMPD4-202ENST00000409031 NEO1Q92859 1461 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 UNC5CO95185 931 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 EPHB2P29323 1055 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 FXR2P51116 673 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMPD4-202ENST00000409031 GINS2Q9Y248 185 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 ZFYVE16Q7Z3T8 1539 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 A0A0U1RQJ8 604 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 LOC100653049A0A140TA62 436 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 AIM2O14862 343 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 KRT34O76011 436 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 WEE2P0C1S8 567 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 ITGA4P13612 1032 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 ATP6V1C1P21283 382 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 OSBPP22059 807 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 NUP107P57740 925 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 FLOT2Q14254 428 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 TMEM139Q8IV31 216 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 CNBD2Q96M20 576 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 MRPL1Q9BYD6 325 aaKnown RBP18.59■□□□□ 0.57
SMPD4-202ENST00000409031 RNF17Q9BXT8 1623 aaKnown RBP18.59■□□□□ 0.57
SMPD4-202ENST00000409031 PPP6R3Q5H9R7 873 aaPredicted RBP18.59■□□□□ 0.57
SMPD4-202ENST00000409031 GPR141Q7Z602 305 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 THAP2Q9H0W7 228 aa18.59■□□□□ 0.57
SMPD4-202ENST00000409031 EPB41L4AQ9HCS5 686 aaPredicted RBP18.59■□□□□ 0.57
SMPD4-202ENST00000409031 DMAP1Q9NPF5 467 aaPredicted RBP18.59■□□□□ 0.57
SMPD4-202ENST00000409031 ZC3H7BQ9UGR2 993 aaKnown RBP18.59■□□□□ 0.57
SMPD4-202ENST00000409031 SERPINB1P30740 379 aa18.58■□□□□ 0.57
SMPD4-202ENST00000409031 RGS2P41220 211 aa18.58■□□□□ 0.57
SMPD4-202ENST00000409031 EIF3EP60228 445 aaKnown RBP18.58■□□□□ 0.57
SMPD4-202ENST00000409031 ATP6V1E2Q96A05 226 aa18.58■□□□□ 0.57
SMPD4-202ENST00000409031 SERPINB2P05120 415 aa18.58■□□□□ 0.57
SMPD4-202ENST00000409031 STAT3P40763 770 aa18.58■□□□□ 0.57
SMPD4-202ENST00000409031 KCNJ2P63252 427 aa18.58■□□□□ 0.57
SMPD4-202ENST00000409031 PPIDQ08752 370 aaKnown RBP18.58■□□□□ 0.57
SMPD4-202ENST00000409031 METTL5Q9NRN9 209 aaKnown RBP18.58■□□□□ 0.57
SMPD4-202ENST00000409031 GRID1Q9ULK0 1009 aa18.58■□□□□ 0.57
SMPD4-202ENST00000409031 RPL26L1Q9UNX3 145 aaKnown RBP18.58■□□□□ 0.57
SMPD4-202ENST00000409031 AURKCQ9UQB9 309 aa18.58■□□□□ 0.57
SMPD4-202ENST00000409031 SYNJ2BP-COX16A0A087WUM0 186 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 LRRC6Q86X45 466 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 C1orf131Q8NDD1 294 aaKnown RBP18.58■□□□□ 0.56
SMPD4-202ENST00000409031 NEDD1Q8NHV4 660 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 COX16Q9P0S2 106 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 TAGLN3Q9UI15 199 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 NAALADL1Q9UQQ1 740 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 USP31Q70CQ4 1352 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 GOLGA8CPA6NN73 597 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 S100BP04271 92 aaPredicted RBP18.58■□□□□ 0.56
SMPD4-202ENST00000409031 MYL2P10916 166 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 PSMC3P17980 439 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 HOXA13P31271 388 aaPredicted RBP18.58■□□□□ 0.56
SMPD4-202ENST00000409031 NLRP11P59045 1033 aaKnown RBP18.58■□□□□ 0.56
SMPD4-202ENST00000409031 MKRN4PQ13434 485 aaPredicted RBP18.58■□□□□ 0.56
SMPD4-202ENST00000409031 TMEM117Q9H0C3 514 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 SEMA6BQ9H3T3 888 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 PCSK1NQ9UHG2 260 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 SLC24A2Q9UI40 661 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 CDY2AQ9Y6F7 541 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 CDY1Q9Y6F8 540 aa18.58■□□□□ 0.56
SMPD4-202ENST00000409031 K7ERI5 159 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 AKAP10O43572 662 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 PRDX5P30044 214 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 NMT1P30419 496 aaKnown RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 ADARP55265 1226 aaKnown RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 RASA2Q15283 850 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 EFHC1Q5JVL4 640 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 CDR2LQ86X02 465 aaPredicted RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 SLC30A5Q8TAD4 765 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 PARD3BQ8TEW8 1205 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 CEP95Q96GE4 821 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 UBE4BO95155 1302 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 CCDC159P0C7I6 412 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 ITKQ08881 620 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 CDO1Q16878 200 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 CDKL3Q8IVW4 592 aaPredicted RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 ZFRQ96KR1 1074 aaKnown RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 BFARQ9NZS9 450 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 CHI3L2Q15782 390 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 LACTB2Q53H82 288 aaPredicted RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 MSTO1Q9BUK6 570 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 MAGED2Q9UNF1 606 aaPredicted RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 PCDHGC5Q9Y5F6 944 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 NPHP3-ACAD11A0A0J9YXS1 232 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 P4HA2O15460 535 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 C21orf2O43822 256 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 TROAPQ12815 778 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 DCTN2Q13561 401 aaKnown RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 TTC39BQ5VTQ0 682 aaPredicted RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 ZNF507Q8TCN5 953 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 TMEM237Q96Q45 408 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 EIF2AK1Q9BQI3 630 aaKnown RBP18.57■□□□□ 0.56
SMPD4-202ENST00000409031 GORASP1Q9BQQ3 440 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 PLA2G12BQ9BX93 195 aa18.57■□□□□ 0.56
SMPD4-202ENST00000409031 PON1P27169 355 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms