RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 NMT1P30419 496 aaKnown RBP21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 LIN9Q5TKA1 542 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 BACE2Q9Y5Z0 518 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 MYH15Q9Y2K3 1946 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 STX6O43752 255 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 FAM189A1O60320 539 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 CLTAP09496 248 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 RPL9P32969 192 aaKnown RBP21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 ZC2HC1CQ53FD0 456 aaPredicted RBP21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 PPM1LQ5SGD2 360 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 AXDND1Q5T1B0 1012 aaPredicted RBP21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 SLC39A4Q6P5W5 647 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 ANKS3Q6ZW76 656 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 SLC7A14Q8TBB6 771 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 RSAD2Q8WXG1 361 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 KCNH6Q9H252 994 aa21.04■□□□□ 0.96
SMARCB1-204ENST00000407422 NOTCH4Q99466 2003 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 TTC26A0AVF1 554 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 CCL16O15467 120 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 PIGRP01833 764 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 NTHL1P78549 312 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 TDGQ13569 410 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 VARS2Q5ST30 1063 aaKnown RBP21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 GET4Q7L5D6 327 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 DYMQ7RTS9 669 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 GRASPQ7Z6J2 395 aaPredicted RBP21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 EPS15L1Q9UBC2 864 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 CCDC39Q9UFE4 941 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 NUB1Q9Y5A7 615 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 MYO15AQ9UKN7 3530 aa21.03■□□□□ 0.96
SMARCB1-204ENST00000407422 HNRNPA1P09651 372 aaKnown RBP eCLIP21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 GTF2BQ00403 316 aa21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 SLC39A14Q15043 492 aa21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 ENOX2Q16206 610 aaKnown RBP21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 RRAGBQ5VZM2 374 aa21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 KRI1Q8N9T8 703 aaKnown RBP21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 PRSS33Q8NF86 280 aa21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 PLEKHA5Q9HAU0 1116 aa21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 STK17AQ9UEE5 414 aa21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 POLIQ9UNA4 740 aa21.02■□□□□ 0.96
SMARCB1-204ENST00000407422 USP34Q70CQ2 3546 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 LACTBL1A8MY62 500 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 TISP43B9A030 160 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 SCP2P22307 547 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 AVPR2P30518 371 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 NHLH1Q02575 133 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 MAP4K3Q8IVH8 894 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 ST13P5Q8NFI4 369 aaPredicted RBP21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 KIF12Q96FN5 646 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 PANK2Q9BZ23 570 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 IKZF4Q9H2S9 585 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 ZSCAN16Q9H4T2 348 aaPredicted RBP21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 IGSF9Q9P2J2 1179 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 ANK1P16157 1881 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 CACNA1HO95180 2353 aa21.01■□□□□ 0.95
SMARCB1-204ENST00000407422 A0A0B4J269 797 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 MYMKA6NI61 221 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 ANKRD63C9JTQ0 380 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 SYN3O14994 580 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 OGTO15294 1046 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 NARSO43776 548 aaKnown RBP21■□□□□ 0.95
SMARCB1-204ENST00000407422 LAMP2P13473 410 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 FSHRP23945 695 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 HOXA9P31269 272 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 MCM4P33991 863 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 GUCY2FP51841 1108 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 ROR1Q01973 937 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 ZBTB6Q15916 424 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 SLC8B1Q6J4K2 584 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 SFR1Q86XK3 245 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 DDX12PQ92771 950 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 SUSD3Q96L08 255 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 MSTO1Q9BUK6 570 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 DMDP11532 3685 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 A0A087X0B3 334 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 TBC1D4O60343 1298 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 TXLNAP40222 546 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 PPP2R3AQ06190 1150 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 MRPL58Q14197 206 aaKnown RBP21■□□□□ 0.95
SMARCB1-204ENST00000407422 UVSSAQ2YD98 709 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 SNX21Q969T3 373 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 RPF1Q9H9Y2 349 aaKnown RBP21■□□□□ 0.95
SMARCB1-204ENST00000407422 HCFC1R1Q9NWW0 138 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 DUSP12Q9UNI6 340 aa21■□□□□ 0.95
SMARCB1-204ENST00000407422 WDR27A2RRH5 827 aa20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 HOXD11P31277 338 aaPredicted RBP20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 ARPP19P56211 112 aa20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 ZNF720Q7Z2F6 126 aa20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 ZNF461Q8TAF7 563 aa20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 DNAJC19Q96DA6 116 aa20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 ST6GALNAC4Q9H4F1 302 aa20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 FBXL5Q9UKA1 691 aa20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 MORC2Q9Y6X9 1032 aaPredicted RBP20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 VPS13AQ96RL7 3174 aa20.99■□□□□ 0.95
SMARCB1-204ENST00000407422 XYLBO75191 536 aa20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 ABLIM3O94929 683 aa20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 ADRB2P07550 413 aa20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 LRPAP1P30533 357 aa20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 NASPP49321 788 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms