RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 C1orf228Q6PIY5 440 aa13.51□□□□□ -0.25
APOBEC3B-204ENST00000407298 PDZD4Q76G19 769 aaPredicted RBP13.51□□□□□ -0.25
APOBEC3B-204ENST00000407298 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
APOBEC3B-204ENST00000407298 CORO1BQ9BR76 489 aa13.51□□□□□ -0.25
APOBEC3B-204ENST00000407298 TOPORSQ9NS56 1045 aaPredicted RBP13.51□□□□□ -0.25
APOBEC3B-204ENST00000407298 SLC38A7Q9NVC3 462 aa13.51□□□□□ -0.25
APOBEC3B-204ENST00000407298 NDRG2Q9UN36 371 aaKnown RBP13.51□□□□□ -0.25
APOBEC3B-204ENST00000407298 ARHGEF35A5YM69 484 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 DTNBO60941 627 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 ABLIM3O94929 683 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 LARGE1O95461 756 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 ATF2P15336 505 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 CEBPBP17676 345 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 PSMC3P17980 439 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 LIG1P18858 919 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 TKTP29401 623 aaKnown RBP13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 CNR2P34972 360 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 MLLT6P55198 1093 aaPredicted RBP13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 ANKRD1Q15327 319 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 SLC5A9Q2M3M2 681 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 TPGS2Q68CL5 300 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 TCEAL8Q8IYN2 117 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 LEMD2Q8NC56 503 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 ERMNQ8TAM6 284 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 DEPDC1BQ8WUY9 529 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 DDX1Q92499 740 aaKnown RBP13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 FAM3CQ92520 227 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 MSANTD3Q96H12 275 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 ZNF512Q96ME7 567 aaPredicted RBP13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 MTMR9Q96QG7 549 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 POLR3CQ9BUI4 534 aaPredicted RBP13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 LMAN1LQ9HAT1 526 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 GJB4Q9NTQ9 266 aa13.5□□□□□ -0.25
APOBEC3B-204ENST00000407298 NOTCH4Q99466 2003 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 A0A087WWV3 80 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 SLC30A4O14863 429 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 SYN3O14994 580 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 ADRB1P08588 477 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 CYP11B2P19099 503 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 CXCL12P48061 93 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 ROR1Q01973 937 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 SPEM2Q0P670 501 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 TRIM29Q14134 588 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 FAM78AQ5JUQ0 283 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 PRSS36Q5K4E3 855 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 ATF7IP2Q5U623 682 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 PADI6Q6TGC4 694 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 PRR23BQ6ZRT6 265 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 CATSPER3Q86XQ3 398 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 KIFAP3Q92845 792 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 SMARCD2Q92925 531 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 ASB16Q96NS5 453 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 CCDC94Q9BW85 323 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 CCDC113Q9H0I3 377 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 CYP4F11Q9HBI6 524 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 ZNF334Q9HCZ1 680 aaPredicted RBP13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 PARD6AQ9NPB6 346 aa13.49□□□□□ -0.25
APOBEC3B-204ENST00000407298 SMIM28A0A1B0GU29 152 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 WDR27A2RRH5 827 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 FAM205CA6NFA0 338 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 TTLL13PA6NNM8 815 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 K7ERI5 159 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 ZNF263O14978 683 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 CTDNEP1O95476 244 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 SPATA31C1P0DKV0 1188 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 TDGF1P13385 188 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 MUTP22033 750 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 FCARP24071 287 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 RPA1P27694 616 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 GDI1P31150 447 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 RPL9P32969 192 aaKnown RBP13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 ST3GAL1Q11201 340 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 LRRC32Q14392 662 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 GRM2Q14416 872 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 ST3GAL2Q16842 350 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 GLRA4Q5JXX5 417 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 EEF1DP3Q658K8 133 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 MAP4K3Q8IVH8 894 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 ZNF687Q8N1G0 1237 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 TNFRSF25Q93038 417 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 CHAMP1Q96JM3 812 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 TRPV4Q9HBA0 871 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 PIAS3Q9Y6X2 628 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 VWA8A3KMH1 1905 aa13.48□□□□□ -0.25
APOBEC3B-204ENST00000407298 PHLPP2Q6ZVD8 1323 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 BRCC3P46736 316 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 ARPP19P56211 112 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 SIM2Q14190 667 aaPredicted RBP13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 CSRP2Q16527 193 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 PPM1JQ5JR12 505 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 CD300LGQ6UXG3 332 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 MFSD6LQ8IWD5 586 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 YAF2Q8IY57 180 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 SPEM1Q8N4L4 309 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 APPL2Q8NEU8 664 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 CSGALNACT1Q8TDX6 532 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 BSNDQ8WZ55 320 aa13.47□□□□□ -0.25
APOBEC3B-204ENST00000407298 TCEAL4Q96EI5 215 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms