RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 CAVIN1Q6NZI2 390 aaKnown RBP11.48□□□□□ -0.57
RPAIN-204ENST00000405578 LLGL2Q6P1M3 1020 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 CRIPAKQ8N1N5 446 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 GLIS3Q8NEA6 775 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 DHTKD1Q96HY7 919 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-204ENST00000405578 CNTNAP3BQ96NU0 1288 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 ACAP3Q96P50 834 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 RPS6KC1Q96S38 1066 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 APOL6Q9BWW8 343 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 MRPL9Q9BYD2 267 aaKnown RBP11.48□□□□□ -0.57
RPAIN-204ENST00000405578 FGFBP2Q9BYJ0 223 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 CNTNAP3Q9BZ76 1288 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 CDT1Q9H211 546 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 RSAD1Q9HA92 442 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 KIAA1586Q9HCI6 787 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 TYW1Q9NV66 732 aaKnown RBP11.48□□□□□ -0.57
RPAIN-204ENST00000405578 KANSL3Q9P2N6 904 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 PARP2Q9UGN5 583 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 MAPK8IP1Q9UQF2 711 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 GDAQ9Y2T3 454 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 STYXL1Q9Y6J8 313 aa11.48□□□□□ -0.57
RPAIN-204ENST00000405578 SPTBN2O15020 2390 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 OTOGLQ3ZCN5 2332 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 ARID2Q68CP9 1835 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 EDN1P05305 212 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 ASGR2P07307 311 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 GRM5P41594 1212 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 CLCN5P51795 746 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 ERVFC1P60507 584 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 MORC3Q14149 939 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 PLPP4Q5VZY2 271 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 TMEM184AQ6ZMB5 413 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 ZNF598Q86UK7 904 aaKnown RBP11.47□□□□□ -0.57
RPAIN-204ENST00000405578 THNSL1Q8IYQ7 743 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 KIAA2013Q8IYS2 634 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 MLKLQ8NB16 471 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
RPAIN-204ENST00000405578 FLCNQ8NFG4 579 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 ZBTB45Q96K62 511 aaPredicted RBP11.47□□□□□ -0.57
RPAIN-204ENST00000405578 TMEM117Q9H0C3 514 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 NXF3Q9H4D5 531 aaKnown RBP11.47□□□□□ -0.57
RPAIN-204ENST00000405578 POMKQ9H5K3 350 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 AGPAT3Q9NRZ7 376 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 SNTG2Q9NY99 539 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 AGO2Q9UKV8 859 aaKnown RBP11.47□□□□□ -0.57
RPAIN-204ENST00000405578 PCDHB12Q9Y5F1 795 aa11.47□□□□□ -0.57
RPAIN-204ENST00000405578 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.47□□□□□ -0.57
RPAIN-204ENST00000405578 MAP1BP46821 2468 aaKnown RBP11.47□□□□□ -0.57
RPAIN-204ENST00000405578 DNAH14Q0VDD8 3507 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 ZMYM2Q9UBW7 1377 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 BICDL2A1A5D9 508 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 CARNS1A5YM72 827 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 TBKBP1A7MCY6 615 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 ANKRD63C9JTQ0 380 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 FSCN2O14926 492 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 FGF18O76093 207 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 FGFR1P11362 822 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 AKAP5P24588 427 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 PRCPP42785 496 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 OSTNP61366 133 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 POU5F1Q01860 360 aaKnown RBP11.46□□□□□ -0.57
RPAIN-204ENST00000405578 RNASELQ05823 741 aaKnown RBP11.46□□□□□ -0.57
RPAIN-204ENST00000405578 LRRC63Q05C16 580 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 KCNC3Q14003 757 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 MYBPC2Q14324 1141 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 ANGPT1Q15389 498 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 NFKBIBQ15653 356 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 NOMO2Q5JPE7 1267 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 SLC39A4Q6P5W5 647 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 SMYD4Q8IYR2 804 aaPredicted RBP11.46□□□□□ -0.57
RPAIN-204ENST00000405578 LRRC43Q8N309 656 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 GPD1LQ8N335 351 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 XXYLT1Q8NBI6 393 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 NOC3LQ8WTT2 800 aaKnown RBP11.46□□□□□ -0.57
RPAIN-204ENST00000405578 LPPQ93052 612 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 RPF1Q9H9Y2 349 aaKnown RBP11.46□□□□□ -0.57
RPAIN-204ENST00000405578 PLEKHA5Q9HAU0 1116 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 HCSTQ9UBK5 93 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 INPP5FQ9Y2H2 1132 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 FRMD4BQ9Y2L6 1034 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 HES2Q9Y543 173 aa11.46□□□□□ -0.57
RPAIN-204ENST00000405578 TCHHQ07283 1943 aa11.46□□□□□ -0.58
RPAIN-204ENST00000405578 FRYLO94915 3013 aa11.46□□□□□ -0.58
RPAIN-204ENST00000405578 EVPLQ92817 2033 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 C2orf16Q68DN1 1984 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 WDR81Q562E7 1941 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 ZNF233A6NK53 670 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 TULP1O00294 542 aaPredicted RBP11.45□□□□□ -0.58
RPAIN-204ENST00000405578 ABLIM1O14639 778 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 TGFB1I1O43294 461 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 EXTL3O43909 919 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 EXOC3O60645 756 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 RECQL4O94761 1208 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 HOXB8P17481 243 aaPredicted RBP11.45□□□□□ -0.58
RPAIN-204ENST00000405578 ADSSP30520 456 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 HOXD13P35453 343 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 MLH1P40692 756 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 CYP2J2P51589 502 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 NLRP12P59046 1061 aa11.45□□□□□ -0.58
RPAIN-204ENST00000405578 PPP2R3AQ06190 1150 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms