RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 ZNF233A6NK53 670 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 PDXKO00764 312 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 XPOTO43592 962 aaKnown RBP15.82■□□□□ 0.12
CDPF1-203ENST00000404583 KIF20AO95235 890 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 IL18RAPO95256 599 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 RPL9P32969 192 aaKnown RBP15.82■□□□□ 0.12
CDPF1-203ENST00000404583 NRIP1P48552 1158 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 BMS1Q14692 1282 aaKnown RBP15.82■□□□□ 0.12
CDPF1-203ENST00000404583 TMEM132DQ14C87 1099 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 CAMK4Q16566 473 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 ZNF658Q5TYW1 1059 aaPredicted RBP15.82■□□□□ 0.12
CDPF1-203ENST00000404583 C12orf56Q8IXR9 622 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 EFCAB13Q8IY85 973 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 GUF1Q8N442 669 aaKnown RBP15.82■□□□□ 0.12
CDPF1-203ENST00000404583 XXYLT1Q8NBI6 393 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 PPP2R3CQ969Q6 453 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 B3GALT6Q96L58 329 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 FBXL18Q96ME1 805 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 TSPAN18Q96SJ8 248 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 HERC2P3Q9BVR0 1158 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 TLE6Q9H808 572 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 STK39Q9UEW8 545 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 MAN1B1Q9UKM7 699 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 DERAQ9Y315 318 aa15.82■□□□□ 0.12
CDPF1-203ENST00000404583 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.81■□□□□ 0.12
CDPF1-203ENST00000404583 TMEM189-UBE2V1I3L0A0 370 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 C2CD2LO14523 706 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 CYP3A5P20815 502 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 LRPAP1P30533 357 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 PRCPP42785 496 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 BRCC3P46736 316 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 PTPN14Q15678 1187 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 SPATA1Q5VX52 437 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 BEST2Q8NFU1 509 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 GOLGA5Q8TBA6 731 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 KIAA1586Q9HCI6 787 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 PDE11AQ9HCR9 933 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 CHST7Q9NS84 486 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 C2CD2Q9Y426 696 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 TTC28Q96AY4 2481 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 SCN1AP35498 2009 aa15.81■□□□□ 0.12
CDPF1-203ENST00000404583 SF3B1O75533 1304 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDPF1-203ENST00000404583 I3L4J1 428 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 LINC01565O15544 149 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 CALUO43852 315 aaPredicted RBP15.8■□□□□ 0.12
CDPF1-203ENST00000404583 EXOC3O60645 756 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 LILRB3O75022 631 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 SNRNP35Q16560 246 aaKnown RBP15.8■□□□□ 0.12
CDPF1-203ENST00000404583 DUSP6Q16828 381 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 USP41Q3LFD5 358 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 TJAP1Q5JTD0 557 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 FAM171A1Q5VUB5 890 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 KIAA0319Q5VV43 1072 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 KIAA1841Q6NSI8 718 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 EP400NLQ6ZTU2 488 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 CEP57Q86XR8 500 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 FAM84AQ96KN4 292 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 MRPL17Q9NRX2 175 aaKnown RBP15.8■□□□□ 0.12
CDPF1-203ENST00000404583 DMAC2Q9NW81 257 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 THEGQ9P2T0 379 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 TRAF3IP3Q9Y228 551 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 IRAK3Q9Y616 596 aa15.8■□□□□ 0.12
CDPF1-203ENST00000404583 BIN1O00499 593 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 PPEF2O14830 753 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 NR3C1P04150 777 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 URODP06132 367 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 GLUD2P49448 558 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 TFAMQ00059 246 aaKnown RBP15.79■□□□□ 0.12
CDPF1-203ENST00000404583 DSG1Q02413 1049 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 RTP2Q5QGT7 225 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 LMBRD2Q68DH5 695 aaPredicted RBP15.79■□□□□ 0.12
CDPF1-203ENST00000404583 SLC9A9Q8IVB4 645 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 DPP3Q9NY33 737 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 CLDND1Q9NY35 253 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 NUB1Q9Y5A7 615 aa15.79■□□□□ 0.12
CDPF1-203ENST00000404583 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.78■□□□□ 0.12
CDPF1-203ENST00000404583 GOLGA6L22H0YM25 854 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 TRAPPC3O43617 180 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 CLASP2O75122 1294 aaKnown RBP15.78■□□□□ 0.12
CDPF1-203ENST00000404583 BMP6P22004 513 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 CASP4P49662 377 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 RBM10P98175 930 aaKnown RBP15.78■□□□□ 0.12
CDPF1-203ENST00000404583 CYP24A1Q07973 514 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 ELAVL2Q12926 359 aaKnown RBP15.78■□□□□ 0.12
CDPF1-203ENST00000404583 ADAM15Q13444 863 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 CTC1Q2NKJ3 1217 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 COBLL1Q53SF7 1204 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 C9orf57Q5W0N0 161 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 NT5DC4Q86YG4 428 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 EFHBQ8N7U6 833 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 RIN2Q8WYP3 895 aaPredicted RBP15.78■□□□□ 0.12
CDPF1-203ENST00000404583 HLA-CQ95604 372 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 PABPC5Q96DU9 382 aaKnown RBP15.78■□□□□ 0.12
CDPF1-203ENST00000404583 KLHL5Q96PQ7 755 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 CDCA3Q99618 268 aaPredicted RBP15.78■□□□□ 0.12
CDPF1-203ENST00000404583 TTPALQ9BTX7 342 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 KIAA1468Q9P260 1216 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 SSX2IPQ9Y2D8 614 aa15.78■□□□□ 0.12
CDPF1-203ENST00000404583 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.78■□□□□ 0.12
CDPF1-203ENST00000404583 ANO9A1A5B4 782 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms