RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 FMNL3Q8IVF7 1028 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 NLGN1Q8N2Q7 840 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 KIFAP3Q92845 792 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 DCLK3Q9C098 648 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 SAE1Q9UBE0 346 aaPredicted RBP12.75□□□□□ -0.37
RBM39-206ENST00000403542 SUFUQ9UMX1 484 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
RBM39-206ENST00000403542 ATP8B3O60423 1300 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 FSCN2O14926 492 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 PLCB3Q01970 1234 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 DLGAP5Q15398 846 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 SPDYCQ5MJ68 293 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 WLSQ5T9L3 541 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 CGB2Q6NT52 195 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 ZNF449Q6P9G9 518 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 TMEM270Q6UE05 265 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 TRMT10CQ7L0Y3 403 aaKnown RBP12.75□□□□□ -0.37
RBM39-206ENST00000403542 ERICH1Q86X53 443 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 MCOLN2Q8IZK6 566 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 RBM15Q96T37 977 aaKnown RBP eCLIP12.75□□□□□ -0.371e-18■■■□□ 14.6
RBM39-206ENST00000403542 SAYSD1Q9NPB0 183 aa12.75□□□□□ -0.37
RBM39-206ENST00000403542 H0YIN7 160 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 GGPS1O95749 300 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 DYNLT1P63172 113 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ZBTB45Q96K62 511 aaPredicted RBP12.74□□□□□ -0.37
RBM39-206ENST00000403542 RMDN3Q96TC7 470 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 PITPNM3Q9BZ71 974 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 TMEM8AQ9HCN3 771 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ALG13Q9NP73 1137 aaKnown RBP12.74□□□□□ -0.37
RBM39-206ENST00000403542 A1CFQ9NQ94 594 aaKnown RBP12.74□□□□□ -0.37
RBM39-206ENST00000403542 NKIRAS1Q9NYS0 192 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 UVRAGQ9P2Y5 699 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ZNF536O15090 1300 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ITIH2P19823 946 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 SLC8A1P32418 973 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 DSG3P32926 999 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 CAP2P40123 477 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 COPS2P61201 443 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 RPL7AP62424 266 aaKnown RBP12.74□□□□□ -0.37
RBM39-206ENST00000403542 CLUL1Q15846 466 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ZBTB41Q5SVQ8 909 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 EP400NLQ6ZTU2 488 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ANKMY2Q8IV38 441 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 WNK4Q96J92 1243 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 PLVAPQ9BX97 442 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ETNK1Q9HBU6 452 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 C1orf112Q9NSG2 853 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ANKFY1Q9P2R3 1169 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 GABBR1Q9UBS5 961 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ZNF70Q9UC06 446 aaPredicted RBP12.74□□□□□ -0.37
RBM39-206ENST00000403542 FZD1Q9UP38 647 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ZNF148Q9UQR1 794 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
RBM39-206ENST00000403542 SPATA31A6Q5VVP1 1343 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 ENTPD3O75355 529 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 KRT15P19012 456 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 PAX7P23759 505 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 TARSP26639 723 aaKnown RBP12.73□□□□□ -0.37
RBM39-206ENST00000403542 NOP14P78316 857 aaKnown RBP12.73□□□□□ -0.37
RBM39-206ENST00000403542 TMEM63BQ5T3F8 832 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 MFSD5Q6N075 450 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 RHBDF2Q6PJF5 856 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 DDX27Q96GQ7 796 aaKnown RBP12.73□□□□□ -0.37
RBM39-206ENST00000403542 SERPINB12Q96P63 405 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 KLF6Q99612 283 aaPredicted RBP12.73□□□□□ -0.37
RBM39-206ENST00000403542 FAM167BQ9BTA0 163 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 VPS37BQ9H9H4 285 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 WHRNQ9P202 907 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 UMODL1Q5DID0 1318 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 EXOC1LA0A1B0GW35 172 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 GOLGA8RI6L899 631 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 CYP24A1Q07973 514 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 ECHDC2Q86YB7 292 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 SYTL5Q8TDW5 730 aaPredicted RBP12.73□□□□□ -0.37
RBM39-206ENST00000403542 CKAP2Q8WWK9 683 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 P3H4Q92791 437 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 TRAIPQ9BWF2 469 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 OSBPL8Q9BZF1 889 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 ADAM22Q9P0K1 906 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 DNPEPQ9ULA0 475 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 PTPRJQ12913 1337 aa12.73□□□□□ -0.37
RBM39-206ENST00000403542 H0Y3Z8 333 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 FDX1P10109 184 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 GBP1P32455 592 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 WDR4P57081 412 aaKnown RBP12.72□□□□□ -0.37
RBM39-206ENST00000403542 GAD2Q05329 585 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 TNFAIP8L3Q5GJ75 292 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 TXNRD3NBQ6F5E7 133 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 SWSAP1Q6NVH7 229 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 MIS18BP1Q6P0N0 1132 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 ATL2Q8NHH9 583 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 ERP27Q96DN0 273 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 FNBP1Q96RU3 617 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 SLC24A3Q9HC58 644 aa12.72□□□□□ -0.37
RBM39-206ENST00000403542 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms