RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TNFAIP2Q03169 654 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 GRIK4Q16099 956 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 C17orf99Q6UX52 265 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 CCNI2Q6ZMN8 369 aaPredicted RBP13.15□□□□□ -0.3
CLIP4-203ENST00000401617 KRT222Q8N1A0 295 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 RPS6KC1Q96S38 1066 aa13.15□□□□□ -0.3
CLIP4-203ENST00000401617 CITO14578 2027 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 GPR25O00155 361 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 PHACTR2O75167 634 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 IL18RAPO95256 599 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 MCF2P10911 925 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 DNA2P51530 1060 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 ZNF157P51786 506 aaPredicted RBP13.14□□□□□ -0.31
CLIP4-203ENST00000401617 EFCAB13Q8IY85 973 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 HDAC7Q8WUI4 952 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLIP4-203ENST00000401617 MTMR12Q9C0I1 747 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
CLIP4-203ENST00000401617 CTTNBP2NLQ9P2B4 639 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 UVRAGQ9P2Y5 699 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 DMGDHQ9UI17 866 aaKnown RBP13.14□□□□□ -0.31
CLIP4-203ENST00000401617 ALG6Q9Y672 507 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 RRN3P2A6NIE6 340 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 ZNF865P0CJ78 1059 aaPredicted RBP13.14□□□□□ -0.31
CLIP4-203ENST00000401617 TNFRSF8P28908 595 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 TAF1CQ15572 869 aaPredicted RBP13.14□□□□□ -0.31
CLIP4-203ENST00000401617 SGSM1Q2NKQ1 1148 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 HDXQ7Z353 690 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 THNSL1Q8IYQ7 743 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 KIAA0319LQ8IZA0 1049 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 PDZD7Q9H5P4 517 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 AVENQ9NQS1 362 aaPredicted RBP13.14□□□□□ -0.31
CLIP4-203ENST00000401617 FLRT1Q9NZU1 646 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 AKT3Q9Y243 479 aa13.14□□□□□ -0.31
CLIP4-203ENST00000401617 PGRMC1O00264 195 aaKnown RBP13.13□□□□□ -0.31
CLIP4-203ENST00000401617 CEP104O60308 925 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 ZEB2O60315 1214 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 CALCAP01258 141 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 VTNP04004 478 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 DCAF12L1Q5VU92 463 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 OLFML2BQ68BL8 750 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 RGMBQ6NW40 437 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 TRIM72Q6ZMU5 477 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 SAPCD2Q86UD0 394 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 ZNF410Q86VK4 478 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 CEP120Q8N960 986 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 CD101Q93033 1021 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 IMPG2Q9BZV3 1241 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 XYLT2Q9H1B5 865 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 CARD9Q9H257 536 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 PCDHB4Q9Y5E5 795 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 TRIP12Q14669 1992 aaPredicted RBP13.13□□□□□ -0.31
CLIP4-203ENST00000401617 MIF4GDA9UHW6 222 aaKnown RBP13.13□□□□□ -0.31
CLIP4-203ENST00000401617 MEFVO15553 781 aaPredicted RBP13.13□□□□□ -0.31
CLIP4-203ENST00000401617 F2P00734 622 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 INHBEP58166 350 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 MYL6P60660 151 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 CBX1P83916 185 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 CENPCQ03188 943 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 KYAT1Q16773 422 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 PTPROQ16827 1216 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 PRAMEF19Q5SWL8 479 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 TMEM270Q6UE05 265 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 IFNL1Q8IU54 200 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 TMEM192Q8IY95 271 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 MCOLN2Q8IZK6 566 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 RBBP8NLQ8NC74 664 aaPredicted RBP13.13□□□□□ -0.31
CLIP4-203ENST00000401617 ZNF653Q96CK0 615 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 FAXDC2Q96IV6 333 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 RPF1Q9H9Y2 349 aaKnown RBP13.13□□□□□ -0.31
CLIP4-203ENST00000401617 STIM2Q9P246 746 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 GJD2Q9UKL4 321 aa13.13□□□□□ -0.31
CLIP4-203ENST00000401617 NOC2LQ9Y3T9 749 aaKnown RBP13.13□□□□□ -0.31
CLIP4-203ENST00000401617 TRIP11Q15643 1979 aa13.12□□□□□ -0.31
CLIP4-203ENST00000401617 SLC10A3P09131 477 aa13.12□□□□□ -0.31
CLIP4-203ENST00000401617 MYBL1P10243 752 aa13.12□□□□□ -0.31
CLIP4-203ENST00000401617 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
CLIP4-203ENST00000401617 MAP9Q49MG5 647 aa13.12□□□□□ -0.31
CLIP4-203ENST00000401617 C8orf74Q6P047 294 aa13.12□□□□□ -0.31
CLIP4-203ENST00000401617 CDR2LQ86X02 465 aaPredicted RBP13.12□□□□□ -0.31
CLIP4-203ENST00000401617 ZNF564Q8TBZ8 553 aaPredicted RBP13.12□□□□□ -0.31
CLIP4-203ENST00000401617 KAT2BQ92831 832 aa13.12□□□□□ -0.31
CLIP4-203ENST00000401617 ANKRD36BP1Q96IX9 119 aa13.12□□□□□ -0.31
CLIP4-203ENST00000401617 NUP85Q9BW27 656 aa13.12□□□□□ -0.31
CLIP4-203ENST00000401617 NIF3L1Q9GZT8 377 aa13.12□□□□□ -0.31
CLIP4-203ENST00000401617 MBLAC1A4D2B0 266 aaPredicted RBP13.11□□□□□ -0.31
CLIP4-203ENST00000401617 BHMG1C9JSJ3 638 aaPredicted RBP13.11□□□□□ -0.31
CLIP4-203ENST00000401617 CCDC188H7C350 402 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 DYNC1LI2O43237 492 aaPredicted RBP13.11□□□□□ -0.31
CLIP4-203ENST00000401617 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
CLIP4-203ENST00000401617 ZMYND10O75800 440 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 TNNC2P02585 160 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 TMEM191BP0C7N4 346 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 STAG3L1P0CL83 205 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 CXCL8P10145 99 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 MYBL2P10244 700 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 PEX5P50542 639 aa13.11□□□□□ -0.31
CLIP4-203ENST00000401617 TNNC1P63316 161 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms