RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 CCDC169A6NNP5 214 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 K7ERI5 159 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 ABLIM3O94929 683 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 LRG1P02750 347 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 CCR2P41597 374 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 PEX3P56589 373 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 FZD5Q13467 585 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 SAFBQ15424 915 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC00544-201ENST00000400540 RSPO4Q2I0M5 234 aaPredicted RBP13.08□□□□□ -0.32
LINC00544-201ENST00000400540 ZNF568Q3ZCX4 644 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 XKR4Q5GH76 650 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 ZBTB41Q5SVQ8 909 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 SLC8B1Q6J4K2 584 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 ALKAL1Q6UXT8 129 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 CCDC83Q8IWF9 413 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 DAW1Q8N136 415 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 C4orf32Q8N8J7 132 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 ZNF461Q8TAF7 563 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 KIFAP3Q92845 792 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 C18orf25Q96B23 403 aaPredicted RBP13.08□□□□□ -0.32
LINC00544-201ENST00000400540 CLDN23Q96B33 292 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.32
LINC00544-201ENST00000400540 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
LINC00544-201ENST00000400540 DLL3Q9NYJ7 618 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 GDE1Q9NZC3 331 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 NCDNQ9UBB6 729 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 NCANO14594 1321 aa13.08□□□□□ -0.32
LINC00544-201ENST00000400540 DENND4CQ5VZ89 1909 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 PP2D1A8MPX8 630 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 E9PMD0 336 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 ABLIM1O14639 778 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 PRRG1O14668 218 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 SPTLC1O15269 473 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 TRAPPC3O43617 180 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 HIP1RO75146 1068 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 HARSP12081 509 aaKnown RBP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 PTPN2P17706 415 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 NPTX2P47972 431 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 PUM1Q14671 1186 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 FAM78AQ5JUQ0 283 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 RTL10Q7L3V2 364 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 HS6ST3Q8IZP7 471 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 ZBTB44Q8NCP5 570 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 SNX29Q8TEQ0 813 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 CCDC94Q9BW85 323 aaPredicted RBP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 FOXP1Q9H334 677 aaPredicted RBP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 CYP4F11Q9HBI6 524 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 AVENQ9NQS1 362 aaPredicted RBP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 PRMT8Q9NR22 394 aaPredicted RBP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 TOPORSQ9NS56 1045 aaPredicted RBP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 LRWD1Q9UFC0 647 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 FBXL5Q9UKA1 691 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 NDRG2Q9UN36 371 aaKnown RBP13.07□□□□□ -0.32
LINC00544-201ENST00000400540 PCDHGA2Q9Y5H1 932 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 INSL5Q9Y5Q6 135 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 OBSL1O75147 1896 aa13.07□□□□□ -0.32
LINC00544-201ENST00000400540 ZFHX4Q86UP3 3567 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
LINC00544-201ENST00000400540 LILRB5O75023 590 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ATF2P15336 505 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 GJA1P17302 382 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 MUTP22033 750 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ELF1P32519 619 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 MAGEA9P43362 315 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 MTAPQ13126 283 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 MAPK7Q13164 816 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ORC2Q13416 577 aaPredicted RBP13.06□□□□□ -0.32
LINC00544-201ENST00000400540 MRPL58Q14197 206 aaKnown RBP13.06□□□□□ -0.32
LINC00544-201ENST00000400540 SEZ6Q53EL9 994 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ZNF852Q6ZMS4 543 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 APBB1IPQ7Z5R6 666 aaPredicted RBP13.06□□□□□ -0.32
LINC00544-201ENST00000400540 TCEAL8Q8IYN2 117 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ZNF687Q8N1G0 1237 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ATRIPQ8WXE1 791 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 NELL1Q92832 810 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ZBTB45Q96K62 511 aaPredicted RBP13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ZSWIM3Q96MP5 696 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 RUSC1Q9BVN2 902 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 MRPL4Q9BYD3 311 aaKnown RBP13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ZSCAN32Q9NX65 697 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ARHGAP28Q9P2N2 729 aa13.06□□□□□ -0.32
LINC00544-201ENST00000400540 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
LINC00544-201ENST00000400540 ZNF638Q14966 1978 aaKnown RBP13.05□□□□□ -0.32
LINC00544-201ENST00000400540 MOSPD3O75425 235 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 SEC24BO95487 1268 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 KCNE1P15382 129 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 PROZP22891 400 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 CDC25AP30304 524 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 RPS9P46781 194 aaKnown RBP13.05□□□□□ -0.32
LINC00544-201ENST00000400540 ADCY1Q08828 1119 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 CTXN3Q4LDR2 81 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 VITQ6UXI7 678 aa13.05□□□□□ -0.32
LINC00544-201ENST00000400540 PDZD4Q76G19 769 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms