RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 CYFIP1Q7L576 1253 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 SHCBP1Q8NEM2 672 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 CCDC134Q9H6E4 229 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 PIM2Q9P1W9 311 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 ADAM21Q9UKJ8 722 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 ZNF335Q9H4Z2 1342 aaPredicted RBP12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L10C9JJH3 530 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 TNPO2O14787 897 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 TADA2AO75478 443 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 XPO7Q9UIA9 1087 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 SMG5Q9UPR3 1016 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 EMSYQ7Z589 1322 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 PITPNM2Q9BZ72 1349 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 GCC2Q8IWJ2 1684 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 KCNJ6P48051 423 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 STX3Q13277 289 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 MAPRE1Q15691 268 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 DAB2IPQ5VWQ8 1189 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 KRT78Q8N1N4 520 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 RFFLQ8WZ73 363 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 EME1Q96AY2 570 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 AGAP3Q96P47 875 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 NPHS2Q9NP85 383 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 EXOSC4Q9NPD3 245 aaKnown RBP12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 NEDD4P46934 1319 aa12.92□□□□□ -0.34
CACNA1C-219ENST00000399649 ECE2O60344 883 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 UGP2Q16851 508 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 AASDHQ4L235 1098 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 C11orf74Q86VG3 221 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 STKLD1Q8NE28 680 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP33Q8TEY7 942 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 EIF2AK1Q9BQI3 630 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 KLC4Q9NSK0 619 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 POTEFA5A3E0 1075 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 ANKRD65E5RJM6 399 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 RABGAP1LQ5R372 815 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 POTEEQ6S8J3 1075 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 HDDC2Q7Z4H3 204 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 ATL2Q8NHH9 583 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 MED15Q96RN5 788 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 ACAD9Q9H845 621 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 C20orf96Q9NUD7 363 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 ARL2BPQ9Y2Y0 163 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 ASB14A6NK59 587 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 C21orf2O43822 256 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 APOA4P06727 396 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 CUL4AQ13619 759 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 SLFNL1Q499Z3 407 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 ICE2Q659A1 982 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 PTRHD1Q6GMV3 140 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 C11orf96Q7Z7L8 435 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 KRT35Q92764 455 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 TUBGCP3Q96CW5 907 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 PIN4Q9Y237 131 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 TK2O00142 265 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 STXBP3O00186 592 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 EEF2KO00418 725 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 EIF2S1P05198 315 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 HMBSP08397 361 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 CDC27P30260 824 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 RAB14P61106 215 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 PHKG1Q16816 387 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 P3H1Q32P28 736 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 OOSP2Q86WS3 158 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 KLHL11Q9NVR0 708 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 CYP2E1P05181 493 aaPredicted RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 RGS4P49798 205 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 KCNK10P57789 538 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 EIF2B5Q13144 721 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 KCNV1Q6PIU1 500 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 USP17L6PQ6QN14 398 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.91□□□□□ -0.342e-6■■■■■ 45.2
CACNA1C-219ENST00000399649 PPP1R14AQ96A00 147 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 KCNK16Q96T55 309 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 RANBP17Q9H2T7 1088 aaKnown RBP12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 SH3BP1Q9Y3L3 701 aa12.91□□□□□ -0.34
CACNA1C-219ENST00000399649 CLK1P49759 484 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 EFNA5P52803 228 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 C10orf53Q8N6V4 93 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 MAN1C1Q9NR34 630 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 LATS2Q9NRM7 1088 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 MRGBPQ9NV56 204 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 UGGT1Q9NYU2 1555 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 PTPRTO14522 1441 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
CACNA1C-219ENST00000399649 MZF1P28698 734 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms