RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 WNT8AQ9H1J5 351 aa27.58■■■□□ 2
SHARPIN-202ENST00000398712 TMEM110-MUSTN1A8MSY1 372 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 RAD51CO43502 376 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 ASS1P00966 412 aaKnown RBP27.57■■■□□ 2
SHARPIN-202ENST00000398712 TMOD1P28289 359 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 GUCY2DQ02846 1103 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 PAK2Q13177 524 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 FAM187BQ17R55 369 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 TMEM270Q6UE05 265 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 RNPC3Q96LT9 517 aaKnown RBP27.57■■■□□ 2
SHARPIN-202ENST00000398712 AP1M1Q9BXS5 423 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 MTMR12Q9C0I1 747 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 EPB41L5Q9HCM4 733 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 CNOT8Q9UFF9 292 aaKnown RBP27.57■■■□□ 2
SHARPIN-202ENST00000398712 HPCAL4Q9UM19 191 aa27.57■■■□□ 2
SHARPIN-202ENST00000398712 HSP90B2PQ58FF3 399 aa27.56■■■□□ 2
SHARPIN-202ENST00000398712 DCAF12L1Q5VU92 463 aa27.56■■■□□ 2
SHARPIN-202ENST00000398712 SMYD5Q6GMV2 418 aa27.56■■■□□ 2
SHARPIN-202ENST00000398712 PPP1R2P3Q6NXS1 205 aa27.56■■■□□ 2
SHARPIN-202ENST00000398712 IFNLR1Q8IU57 520 aaPredicted RBP27.56■■■□□ 2
SHARPIN-202ENST00000398712 LINC01465Q8N7H1 131 aa27.56■■■□□ 2
SHARPIN-202ENST00000398712 RBBP8NLQ8NC74 664 aaPredicted RBP27.56■■■□□ 2
SHARPIN-202ENST00000398712 ZNF668Q96K58 619 aaPredicted RBP27.56■■■□□ 2
SHARPIN-202ENST00000398712 ZSWIM1Q9BR11 485 aa27.56■■■□□ 2
SHARPIN-202ENST00000398712 ABHD16BQ9H3Z7 469 aa27.56■■■□□ 2
SHARPIN-202ENST00000398712 SLITRK6Q9H5Y7 841 aa27.56■■■□□ 2
SHARPIN-202ENST00000398712 AVENQ9NQS1 362 aaPredicted RBP27.56■■■□□ 2
SHARPIN-202ENST00000398712 ZNF236Q9UL36 1845 aa27.56■■■□□ 2
SHARPIN-202ENST00000398712 FGGP02679 453 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 CYP1A1P04798 512 aaPredicted RBP27.55■■■□□ 2
SHARPIN-202ENST00000398712 ZNF286BP0CG31 522 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 COMTP21964 271 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 NNTQ13423 1086 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 PPP2R5EQ16537 467 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 SGSM1Q2NKQ1 1148 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 DUSP28Q4G0W2 176 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 THNSL1Q8IYQ7 743 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 MCOLN2Q8IZK6 566 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 ZBTB10Q96DT7 871 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 TINF2Q9BSI4 451 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 C16orf70Q9BSU1 422 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 SLC5A4Q9NY91 659 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 SLC15A5A6NIM6 579 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 B4GALT5O43286 388 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 IL18RAPO95256 599 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 TMEM191BP0C7N4 346 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 GNA15P30679 374 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 NSFP46459 744 aaKnown RBP27.55■■■□□ 2
SHARPIN-202ENST00000398712 FAM193AP78312 1265 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 CENPCQ03188 943 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 TRPC3Q13507 836 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 CAVIN3Q969G5 261 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 PTPN18Q99952 460 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 MINDY3Q9H8M7 445 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 IFT122Q9HBG6 1241 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 MED4Q9NPJ6 270 aa27.55■■■□□ 2
SHARPIN-202ENST00000398712 UMODL1Q5DID0 1318 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.54■■■□□ 2
SHARPIN-202ENST00000398712 H3BQF6 201 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 H3BRB1 525 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 B4GALT4O60513 344 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 CALCAP01258 141 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 TNNC2P02585 160 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 HOXC6P09630 235 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 AARSP49588 968 aaKnown RBP eCLIP27.54■■■□□ 2
SHARPIN-202ENST00000398712 EEF1DP3Q658K8 133 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 SND1Q7KZF4 910 aaKnown RBP eCLIP27.54■■■□□ 2
SHARPIN-202ENST00000398712 CCDC26Q8TAB7 109 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 ALG3Q92685 438 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 ANKRD36BP1Q96IX9 119 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 CDT1Q9H211 546 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 TUT1Q9H6E5 874 aaKnown RBP27.54■■■□□ 2
SHARPIN-202ENST00000398712 RRAGCQ9HB90 399 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 CHORDC1Q9UHD1 332 aaPredicted RBP27.54■■■□□ 2
SHARPIN-202ENST00000398712 AKT3Q9Y243 479 aa27.54■■■□□ 2
SHARPIN-202ENST00000398712 GOLGA6L10A0A0M3HER8 536 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 POLR3GO15318 223 aaPredicted RBP27.53■■■□□ 2
SHARPIN-202ENST00000398712 SART1O43290 800 aaKnown RBP27.53■■■□□ 2
SHARPIN-202ENST00000398712 CST3P01034 146 aaPredicted RBP27.53■■■□□ 2
SHARPIN-202ENST00000398712 TFAMQ00059 246 aaKnown RBP27.53■■■□□ 2
SHARPIN-202ENST00000398712 TNFAIP2Q03169 654 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 ACVR2BQ13705 512 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 IQSEC1Q6DN90 963 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 EIF1ADQ8N9N8 165 aaKnown RBP27.53■■■□□ 2
SHARPIN-202ENST00000398712 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.53■■■□□ 2
SHARPIN-202ENST00000398712 CCDC102AQ96A19 550 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 GDAP1L1Q96MZ0 367 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 RPF1Q9H9Y2 349 aaKnown RBP27.53■■■□□ 2
SHARPIN-202ENST00000398712 ANK1P16157 1881 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 CCDC66A2RUB6 948 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 SPOPO43791 374 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 HOXD8P13378 290 aaPredicted RBP27.53■■■□□ 2
SHARPIN-202ENST00000398712 SMPD1P17405 629 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 NAA35Q5VZE5 725 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 MTHFD1LQ6UB35 978 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 MAATS1Q7Z4T9 603 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 UBR7Q8N806 425 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 OR6J1Q8NGC5 347 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 CD101Q93033 1021 aa27.53■■■□□ 2
SHARPIN-202ENST00000398712 NIF3L1Q9GZT8 377 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms