RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 TRAPPC11Q7Z392 1133 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 DAGLBQ8NCG7 672 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 NIF3L1Q9GZT8 377 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 FBXL5Q9UKA1 691 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 INTUQ9ULD6 942 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 ZNF197O14709 1029 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 EXTL3O43909 919 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 SREBF2Q12772 1141 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 STAT4Q14765 748 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 FASTKD1Q53R41 847 aaKnown RBP17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 N4BP2L2Q92802 583 aaPredicted RBP17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 PRMT6Q96LA8 375 aaPredicted RBP17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 AGPAT5Q9NUQ2 364 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 SLC9A1P19634 815 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 TERF2Q15554 542 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 LCA5Q86VQ0 697 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 CNPY4Q8N129 248 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 HIPK4Q8NE63 616 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 TAF6LQ9Y6J9 622 aa17.08■□□□□ 0.32
PCDHA12-201ENST00000398631 HAUS5O94927 633 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 HADHAP40939 763 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 ACADSBP45954 432 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 CPT1AP50416 773 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 FXR1P51114 621 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 CATSPER3Q86XQ3 398 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 SH3KBP1Q96B97 665 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 GLT1D1Q96MS3 346 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 ZDHHC15Q96MV8 337 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 CYTH2Q99418 400 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 SENP1Q9P0U3 644 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 DIAPH2O60879 1101 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 DNAJC6O75061 913 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 UPP2O95045 317 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 NR1I3Q14994 352 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 NAB2Q15742 525 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 NOTUMQ6P988 496 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 TTC30BQ8N4P2 665 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 ZNF512Q96ME7 567 aaPredicted RBP17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 ZFP69BQ9UJL9 534 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 TARSL2A2RTX5 802 aaKnown RBP17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 RPSAP08865 295 aaKnown RBP17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 PYGBP11216 843 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 LBRQ14739 615 aaKnown RBP17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 SNX17Q15036 470 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 WDR24Q96S15 920 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 MRPL40Q9NQ50 206 aaKnown RBP17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 KLHL11Q9NVR0 708 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 PPRC1Q5VV67 1664 aaKnown RBP17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 CFAP69A5D8W1 941 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 CTDNEP1O95476 244 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 ARFIP2P53365 341 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 ANO4Q32M45 955 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 MTHFD1LQ6UB35 978 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 HPS5Q9UPZ3 1129 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
PCDHA12-201ENST00000398631 KITP10721 976 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 TCF7P36402 384 aaPredicted RBP17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 RPAINQ86UA6 219 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 ACER1Q8TDN7 264 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 MCEEQ96PE7 176 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 DCTN4Q9UJW0 460 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 PSMD3O43242 534 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 ARHGDIAP52565 204 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 CAPRIN1Q14444 709 aaKnown RBP17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 TAF11Q15544 211 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 THEMIS2Q5TEJ8 643 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 TMEM117Q9H0C3 514 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 FAM49BQ9NUQ9 324 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 AIPL1Q9NZN9 384 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 CCDC195A0A1B0GUA6 201 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 GMNCA6NCL1 334 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 MSH4O15457 936 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 SPAG7O75391 227 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 P3H1Q32P28 736 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 ZKSCAN4Q969J2 545 aaPredicted RBP17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 ATP6V1G3Q96LB4 118 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 APRTP07741 180 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 NLRP11P59045 1033 aaKnown RBP17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 ST8SIA6P61647 398 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 DEUP1Q05D60 604 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 NFIAQ12857 509 aa17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 SMAD1Q15797 465 aaKnown RBP17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 PDCD2Q16342 344 aaPredicted RBP17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 BEND6Q5SZJ8 279 aaPredicted RBP17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 PPHLN1Q8NEY8 458 aaKnown RBP17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.06■□□□□ 0.32
PCDHA12-201ENST00000398631 PRRG1O14668 218 aa17.05■□□□□ 0.32
PCDHA12-201ENST00000398631 TADA3O75528 432 aa17.05■□□□□ 0.32
PCDHA12-201ENST00000398631 GTF2A2P52657 109 aa17.05■□□□□ 0.32
PCDHA12-201ENST00000398631 RASGRP2Q7LDG7 609 aa17.05■□□□□ 0.32
PCDHA12-201ENST00000398631 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
PCDHA12-201ENST00000398631 ERO1BQ86YB8 467 aa17.05■□□□□ 0.32
PCDHA12-201ENST00000398631 LRRC37BQ96QE4 947 aa17.05■□□□□ 0.32
PCDHA12-201ENST00000398631 TGS1Q96RS0 853 aaKnown RBP17.05■□□□□ 0.32
PCDHA12-201ENST00000398631 LBHD1Q9BQE6 289 aaPredicted RBP17.05■□□□□ 0.32
PCDHA12-201ENST00000398631 AFF4Q9UHB7 1163 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms