RNA–Protein interactions for RNA: ENST00000398594.3

PCDHGB7-201, Transcript of protocadherin gamma subfamily B, 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB7, Length 4,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7-201ENST00000398594 VPS11Q9H270 941 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 KRT38O76015 456 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 KRT14P02533 472 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 NAMPTP43490 491 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 ENGASEQ8NFI3 743 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 CALR3Q96L12 384 aaKnown RBP15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 SLITRK1Q96PX8 696 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 TMEM117Q9H0C3 514 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 AGO4Q9HCK5 861 aaKnown RBP15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 A1CFQ9NQ94 594 aaKnown RBP15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 CHRNA3P32297 505 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 SLC26A2P50443 739 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 CLCN6P51797 869 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 EIF3BP55884 814 aaKnown RBP15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 NUDT18Q6ZVK8 323 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 SLC35G2Q8TBE7 412 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 MORC4Q8TE76 937 aa15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 PABPC5Q96DU9 382 aaKnown RBP15.17■□□□□ 0.02
PCDHGB7-201ENST00000398594 SSU72P8A0A1W2PR75 194 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 ATP9BO43861 1147 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 KLK7P49862 253 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 EIF3EP60228 445 aaKnown RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 NSUN2Q08J23 767 aaKnown RBP eCLIP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 DEFB128Q7Z7B8 93 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 TADA2BQ86TJ2 420 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 MTMR12Q9C0I1 747 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 DYRK4Q9NR20 520 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 DPP3Q9NY33 737 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 CHORDC1Q9UHD1 332 aaPredicted RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 MID2Q9UJV3 735 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 DEPDC5O75140 1603 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 PNMA6AP0CW24 399 aaPredicted RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 ZFXP17010 805 aaPredicted RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 BRD2P25440 801 aaKnown RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 DEUP1Q05D60 604 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 BFSP2Q13515 415 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 GLE1Q53GS7 698 aaKnown RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 MMTAG2Q9BU76 263 aaKnown RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 UVRAGQ9P2Y5 699 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 APOL1O14791 398 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 BAG2O95816 211 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 ATP1A1P05023 1023 aaKnown RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 ALDH1A3P47895 512 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 CCT5P48643 541 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 SNRPFP62306 86 aaKnown RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 ERVK-24P63145 666 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 NR1I3Q14994 352 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 SYCP2LQ5T4T6 812 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 TACO1Q9BSH4 297 aaKnown RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 PPP1R3GB7ZBB8 358 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 ZC3H11AO75152 810 aaKnown RBP eCLIP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 ZWINTO95229 277 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 IRF1P10914 325 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 CYP2C19P33261 490 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 PSMC6P62333 389 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 FKBP1AP62942 108 aaKnown RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 GIT2Q14161 759 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 DBN1Q16643 649 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 C6orf118Q5T5N4 469 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 DPF3Q92784 378 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 AMACRQ9UHK6 382 aa15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.16■□□□□ 0.02
PCDHGB7-201ENST00000398594 UBA6A0AVT1 1052 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 ACO1P21399 889 aaKnown RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 SESN2P58004 480 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 POU5F1BQ06416 359 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 PDIA2Q13087 525 aaKnown RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 ORC1Q13415 861 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 C4orf19Q8IY42 314 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 SLC7A14Q8TBB6 771 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 BHMTQ93088 406 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 RASSF4Q9H2L5 321 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 ARHGEF28Q8N1W1 1705 aaKnown RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 COPEO14579 308 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 PPP1R12AO14974 1030 aaPredicted RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 PQBP1O60828 265 aaKnown RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 FAM200BP0CF97 657 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 GSPT2Q8IYD1 628 aaKnown RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 CEP120Q8N960 986 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 ATP8B4Q8TF62 1192 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 TRAPPC12Q8WVT3 735 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 DDX50Q9BQ39 737 aaKnown RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 TSR3Q9UJK0 312 aaKnown RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 GAKO14976 1311 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 PNPLA4P41247 253 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 KLHDC7AQ5VTJ3 777 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 SRRM1Q8IYB3 904 aaKnown RBP15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 CCDC197Q8NCU1 140 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 USP33Q8TEY7 942 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 CPB2Q96IY4 423 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 RASA4BC9J798 803 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 FAM86B1E9PN63 330 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 RASA4O43374 803 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 FAM86B2P0C5J1 330 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 ARSEP51690 589 aa15.15■□□□□ 0.02
PCDHGB7-201ENST00000398594 ADCY2Q08462 1091 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms