RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 HTRA2O43464 458 aaPredicted RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 TMEM127O75204 238 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 OFD1O75665 1012 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 TOX4O94842 621 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 LY86O95711 162 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 MAP4K4O95819 1239 aaPredicted RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 TRIM27P14373 513 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 SLC16A1P53985 500 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 SESN2P58004 480 aaPredicted RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 BPIFB4P59827 614 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 CDK17Q00537 523 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 KIF23Q02241 960 aaPredicted RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 TIGD2Q4W5G0 525 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 IFIT1BQ5T764 474 aaKnown RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 C1QL2Q7Z5L3 287 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 CLEC14AQ86T13 490 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 ZNF366Q8N895 744 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 BOLLQ8N9W6 283 aaKnown RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 GLB1L3Q8NCI6 653 aaPredicted RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 MDGA1Q8NFP4 955 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 DIS3LQ8TF46 1054 aaKnown RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 GFM2Q969S9 779 aaKnown RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 SLC7A6OSQ96CW6 309 aaPredicted RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 C1GALT1C1Q96EU7 318 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 MVB12AQ96EY5 273 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 FAM193BQ96PV7 902 aaPredicted RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 IL23AQ9NPF7 189 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 RBM12Q9NTZ6 932 aaKnown RBP3.56□□□□□ -1.84
CD47-203ENST00000398258 RCAN3Q9UKA8 241 aa3.56□□□□□ -1.84
CD47-203ENST00000398258 FAM171A2A8MVW0 826 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 AP1G1O43747 822 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 RBMXL2O75526 392 aaKnown RBP3.55□□□□□ -1.84
CD47-203ENST00000398258 FSBPO95073 299 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 KRT18P05783 430 aaKnown RBP3.55□□□□□ -1.84
CD47-203ENST00000398258 MYL1P05976 194 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 LTA4HP09960 611 aaKnown RBP3.55□□□□□ -1.84
CD47-203ENST00000398258 GAAP10253 952 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 XPAP23025 273 aaPredicted RBP3.55□□□□□ -1.84
CD47-203ENST00000398258 CTSSP25774 331 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 CD69Q07108 199 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 MAPK7Q13164 816 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 UBE4AQ14139 1066 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 GRM3Q14832 879 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 KRT40Q6A162 431 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 TAS1R1Q7RTX1 841 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 SRGAP1Q7Z6B7 1085 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 SRRM1Q8IYB3 904 aaKnown RBP3.55□□□□□ -1.84
CD47-203ENST00000398258 PLA2G15Q8NCC3 412 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 PIK3C3Q8NEB9 887 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 GPR156Q8NFN8 814 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 UIMC1Q96RL1 719 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 MAP3K14Q99558 947 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 SARGQ9BW04 601 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 TMEM60Q9H2L4 133 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 CYP4F11Q9HBI6 524 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 NCDNQ9UBB6 729 aa3.55□□□□□ -1.84
CD47-203ENST00000398258 SAP30BPQ9UHR5 308 aaKnown RBP3.55□□□□□ -1.84
CD47-203ENST00000398258 CFAP20Q9Y6A4 193 aaKnown RBP3.55□□□□□ -1.84
CD47-203ENST00000398258 RPTORQ8N122 1335 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 ANO9A1A5B4 782 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 CCDC154A6NI56 674 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 GOLGA6L6A8MZA4 724 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 DAPK3O43293 454 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 MTSS1O43312 755 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 SGTAO43765 313 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 PHF2O75151 1096 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 TUSC2O75896 110 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 MATN4O95460 622 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 PHKG2P15735 406 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 FXR1P51114 621 aaKnown RBP eCLIP3.54□□□□□ -1.84
CD47-203ENST00000398258 USP14P54578 494 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 WNT3AP56704 352 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 CCT2P78371 535 aaKnown RBP3.54□□□□□ -1.84
CD47-203ENST00000398258 DSC2Q02487 901 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 MGAT5Q09328 741 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 ZNF267Q14586 743 aaPredicted RBP3.54□□□□□ -1.84
CD47-203ENST00000398258 SEPT2Q15019 361 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 MST1LQ2TV78 715 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 PGS1Q32NB8 556 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 LMBR1LQ6UX01 489 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 CATIPQ7Z7H3 387 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 KIAA0319LQ8IZA0 1049 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 OR2I1PQ8NGU4 316 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 SVIPQ8NHG7 77 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.54□□□□□ -1.84
CD47-203ENST00000398258 NSUN6Q8TEA1 469 aaKnown RBP3.54□□□□□ -1.84
CD47-203ENST00000398258 SNX33Q8WV41 574 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 NRG4Q8WWG1 115 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 LINC00476Q8WZB0 136 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 LPPQ93052 612 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 HDAC10Q969S8 669 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 TTC17Q96AE7 1141 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 ZNF512Q96ME7 567 aaPredicted RBP3.54□□□□□ -1.84
CD47-203ENST00000398258 ZNF778Q96MU6 729 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 TCF25Q9BQ70 676 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 C14orf93Q9H972 538 aaKnown RBP3.54□□□□□ -1.84
CD47-203ENST00000398258 ING3Q9NXR8 418 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 DKK2Q9UBU2 259 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 DNM3Q9UQ16 869 aa3.54□□□□□ -1.84
CD47-203ENST00000398258 CGB1A6NKQ9 187 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms