RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 NFX1Q12986 1120 aaKnown RBP20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 LONRF2Q1L5Z9 754 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 FBXO47Q5MNV8 452 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 WDR59Q6PJI9 974 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 C15orf39Q6ZRI6 1047 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 WDR49Q8IV35 697 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 ACAP3Q96P50 834 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 EIF3CQ99613 913 aaKnown RBP20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 TRIM6Q9C030 488 aaPredicted RBP20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 COQ4Q9Y3A0 265 aa20.83■□□□□ 0.92
PDLIM2-204ENST00000397760 KRT86O43790 486 aa20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 C4BPAP04003 597 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 UCHL3P15374 230 aa20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 MNX1P50219 401 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 ZACNQ401N2 412 aa20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 RRAGAQ7L523 313 aa20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 FAM126BQ8IXS8 530 aa20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 FBXL13Q8NEE6 735 aa20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 OR5B17Q8NGF7 314 aa20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 TAS1R2Q8TE23 839 aa20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 BAP1Q92560 729 aa20.82■□□□□ 0.92
PDLIM2-204ENST00000397760 MROH7Q68CQ1 1323 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 SASH3O75995 380 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 IPO7O95373 1038 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 GHRP10912 638 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 HNRNPH3P31942 346 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 AP3M2P53677 418 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 SMC1AQ14683 1233 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 UBXN11Q5T124 520 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 TDRD10Q5VZ19 366 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 TRAPPC11Q7Z392 1133 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 SEMA4DQ92854 862 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 OSBPL7Q9BZF2 842 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 EPC1Q9H2F5 836 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 AGO3Q9H9G7 860 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 RAB20Q9NX57 234 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 CCDC66A2RUB6 948 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 LACTBL1A8MY62 500 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 LRRN2O75325 713 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 GPS2Q13227 327 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 BIRC3Q13489 604 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 SLC10A6Q3KNW5 377 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 PAPD7Q5XG87 772 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 GJB7Q6PEY0 223 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 TSGA10Q9BZW7 698 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 SNTG2Q9NY99 539 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 PUF60Q9UHX1 559 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 FBXL5Q9UKA1 691 aa20.81■□□□□ 0.92
PDLIM2-204ENST00000397760 ANO9A1A5B4 782 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 MEFVO15553 781 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 CD4P01730 458 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 MCM3P25205 808 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 CD52P31358 61 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 GJA8P48165 433 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 ATN1P54259 1190 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 LPIN1Q14693 890 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 DUOXA2Q1HG44 320 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 TWF2Q6IBS0 349 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 PDXDC1Q6P996 788 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 HDXQ7Z353 690 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 CAGE1Q8TC20 777 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 ASB7Q9H672 318 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 ERVK-5Q9HDB9 667 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 CHST12Q9NRB3 414 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 APEX2Q9UBZ4 518 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 PADI3Q9ULW8 664 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 HES2Q9Y543 173 aa20.8■□□□□ 0.92
PDLIM2-204ENST00000397760 LRRC53A6NM62 1247 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 TFAMQ00059 246 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 PAK2Q13177 524 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 BEND6Q5SZJ8 279 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 IQCEQ6IPM2 695 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 PHLDB3Q6NSJ2 640 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 WDR93Q6P2C0 686 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 TRAF7Q6Q0C0 670 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 SLC39A5Q6ZMH5 540 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 EFCAB13Q8IY85 973 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 USP38Q8NB14 1042 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 NXF3Q9H4D5 531 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 SQORQ9Y6N5 450 aa20.79■□□□□ 0.92
PDLIM2-204ENST00000397760 PQBP1O60828 265 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 PHACTR2O75167 634 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 HLA-DRAP01903 254 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 TMEM191BP0C7N4 346 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 ANKRD36BP1Q96IX9 119 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 SPAG5Q96R06 1193 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 MTMR12Q9C0I1 747 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 NUCKS1Q9H1E3 243 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 ST7Q9NRC1 585 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 DNAJC12Q9UKB3 198 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 AJAP1Q9UKB5 411 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 TLR3O15455 904 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 VNN1O95497 513 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 ABL1P00519 1130 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 PIK3CAP42336 1068 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 YARSP54577 528 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 CKAP4Q07065 602 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 RAPGEF1Q13905 1077 aa20.78■□□□□ 0.92
PDLIM2-204ENST00000397760 CCDC122Q5T0U0 273 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms