RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RALGAPA2Q2PPJ7 1873 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 SMIM28A0A1B0GU29 152 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 A0A1W2PQJ5 194 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 ATF7P17544 494 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-204ENST00000397443 AFF1P51825 1210 aaKnown RBP22.84■■□□□ 1.25
CPNE1-204ENST00000397443 MYL6P60660 151 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 WDR44Q5JSH3 913 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 BAP1Q92560 729 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 KAT5Q92993 513 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 NT5C1BQ96P26 610 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 SPAG5Q96R06 1193 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 DPP3Q9NY33 737 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 C2CD2Q9Y426 696 aa22.84■■□□□ 1.25
CPNE1-204ENST00000397443 PNMA6AP0CW24 399 aaPredicted RBP22.83■■□□□ 1.25
CPNE1-204ENST00000397443 CAPN2P17655 700 aa22.83■■□□□ 1.25
CPNE1-204ENST00000397443 UBE2Q1Q7Z7E8 422 aa22.83■■□□□ 1.25
CPNE1-204ENST00000397443 ECHDC2Q86YB7 292 aa22.83■■□□□ 1.25
CPNE1-204ENST00000397443 FTHL17Q9BXU8 183 aa22.83■■□□□ 1.25
CPNE1-204ENST00000397443 PLAGL2Q9UPG8 496 aa22.83■■□□□ 1.25
CPNE1-204ENST00000397443 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.83■■□□□ 1.252e-10■□□□□ 8.4
CPNE1-204ENST00000397443 RAG1P15918 1043 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 POLR2BP30876 1174 aaKnown RBP22.82■■□□□ 1.24
CPNE1-204ENST00000397443 ARID5AQ03989 594 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 SLC24A5Q71RS6 500 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 OR8K1Q8NGG5 319 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 IQCDQ96DY2 449 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 RPS6KC1Q96S38 1066 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 TRAIPQ9BWF2 469 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 TSPYL2Q9H2G4 693 aaPredicted RBP22.82■■□□□ 1.24
CPNE1-204ENST00000397443 GOLGA2P5Q9HBQ8 144 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 C1orf112Q9NSG2 853 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 SIX4Q9UIU6 781 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 INPP5FQ9Y2H2 1132 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 C9IYK1 514 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 ZNF623O75123 536 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 TSR1Q2NL82 804 aaKnown RBP22.82■■□□□ 1.24
CPNE1-204ENST00000397443 E4F1Q66K89 784 aaPredicted RBP22.82■■□□□ 1.24
CPNE1-204ENST00000397443 MRPL10Q7Z7H8 261 aaKnown RBP22.82■■□□□ 1.24
CPNE1-204ENST00000397443 IMPG2Q9BZV3 1241 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 RSAD1Q9HA92 442 aa22.82■■□□□ 1.24
CPNE1-204ENST00000397443 R3HCC1Q9Y3T6 440 aaKnown RBP22.82■■□□□ 1.24
CPNE1-204ENST00000397443 ARL5CA6NH57 179 aa22.81■■□□□ 1.24
CPNE1-204ENST00000397443 PTGESO14684 152 aa22.81■■□□□ 1.24
CPNE1-204ENST00000397443 NOP14P78316 857 aaKnown RBP22.81■■□□□ 1.24
CPNE1-204ENST00000397443 PDXDC1Q6P996 788 aa22.81■■□□□ 1.24
CPNE1-204ENST00000397443 BEST2Q8NFU1 509 aa22.81■■□□□ 1.24
CPNE1-204ENST00000397443 PGBD4Q96DM1 585 aa22.81■■□□□ 1.24
CPNE1-204ENST00000397443 NAA15Q9BXJ9 866 aaKnown RBP22.81■■□□□ 1.24
CPNE1-204ENST00000397443 APOBEC3GQ9HC16 384 aaKnown RBP22.81■■□□□ 1.24
CPNE1-204ENST00000397443 AGAP1Q9UPQ3 857 aa22.81■■□□□ 1.24
CPNE1-204ENST00000397443 TIMP1P01033 207 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 SKIP12755 728 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 SCNN1GP51170 649 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 DRAP1Q14919 205 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-204ENST00000397443 ZNF699Q32M78 642 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 NT5DC4Q86YG4 428 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 PANX2Q96RD6 677 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 DNAJC7Q99615 494 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 ARID3AQ99856 593 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 BAG1Q99933 345 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-204ENST00000397443 MIOSQ9NXC5 875 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 GIT1Q9Y2X7 761 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 DERAQ9Y315 318 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 NUB1Q9Y5A7 615 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 ENPP3O14638 875 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 CXCL10P02778 98 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 CSF2RAP15509 400 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 XKR4Q5GH76 650 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 HELQQ8TDG4 1101 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 APBB2Q92870 758 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 EDEM3Q9BZQ6 932 aa22.8■■□□□ 1.24
CPNE1-204ENST00000397443 UBQLN1Q9UMX0 589 aaKnown RBP22.8■■□□□ 1.24
CPNE1-204ENST00000397443 PPEF2O14830 753 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 PARNO95453 639 aaKnown RBP22.79■■□□□ 1.24
CPNE1-204ENST00000397443 POMCP01189 267 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 FGFR1P11362 822 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 SKILP12757 684 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 KCNE1P15382 129 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 USP8P40818 1118 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 CCZ1BP86790 482 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 CCZ1P86791 482 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-204ENST00000397443 SOX4Q06945 474 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-204ENST00000397443 ZBTB6Q15916 424 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 COL13A1Q5TAT6 717 aaPredicted RBP22.79■■□□□ 1.24
CPNE1-204ENST00000397443 ZNF598Q86UK7 904 aaKnown RBP22.79■■□□□ 1.24
CPNE1-204ENST00000397443 GSTCDQ8NEC7 633 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 KREMEN1Q96MU8 473 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 CACNG4Q9UBN1 327 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 NXF1Q9UBU9 619 aaKnown RBP22.79■■□□□ 1.24
CPNE1-204ENST00000397443 ITGA11Q9UKX5 1188 aa22.79■■□□□ 1.24
CPNE1-204ENST00000397443 PDCD11Q14690 1871 aaKnown RBP22.79■■□□□ 1.24
CPNE1-204ENST00000397443 KIAA0355O15063 1070 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 ASS1P00966 412 aaKnown RBP22.78■■□□□ 1.24
CPNE1-204ENST00000397443 SGSM1Q2NKQ1 1148 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 SFMBT2Q5VUG0 894 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 SCARA5Q6ZMJ2 495 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 CXorf38Q8TB03 319 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 STK33Q9BYT3 514 aa22.78■■□□□ 1.24
CPNE1-204ENST00000397443 ZNHIT6Q9NWK9 470 aaKnown RBP22.78■■□□□ 1.24
CPNE1-204ENST00000397443 FBXL5Q9UKA1 691 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms