RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ZNF623O75123 536 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 LRRC26Q2I0M4 334 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 KREMEN1Q96MU8 473 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 SPAG5Q96R06 1193 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 HIPK3Q9H422 1215 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 APOBEC3GQ9HC16 384 aaKnown RBP29.63■■■□□ 2.33
CPNE1-203ENST00000397442 AIPL1Q9NZN9 384 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 ATP11BQ9Y2G3 1177 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 A0A0U1RQF3 1178 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 SOWAHDA6NJG2 315 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 F8VZ95 297 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 CDK17Q00537 523 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 DRAP1Q14919 205 aaPredicted RBP29.63■■■□□ 2.33
CPNE1-203ENST00000397442 TSR1Q2NL82 804 aaKnown RBP29.63■■■□□ 2.33
CPNE1-203ENST00000397442 SFMBT2Q5VUG0 894 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 SPOPLQ6IQ16 392 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 RTN4RL1Q86UN2 441 aaPredicted RBP29.63■■■□□ 2.33
CPNE1-203ENST00000397442 WNT8AQ9H1J5 351 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 TBX21Q9UL17 535 aa29.63■■■□□ 2.33
CPNE1-203ENST00000397442 ASS1P00966 412 aaKnown RBP29.62■■■□□ 2.33
CPNE1-203ENST00000397442 ATF7P17544 494 aaPredicted RBP29.62■■■□□ 2.33
CPNE1-203ENST00000397442 RAB27AP51159 221 aa29.62■■■□□ 2.33
CPNE1-203ENST00000397442 MYL6P60660 151 aa29.62■■■□□ 2.33
CPNE1-203ENST00000397442 CYP26C1Q6V0L0 522 aa29.62■■■□□ 2.33
CPNE1-203ENST00000397442 TMTC1Q8IUR5 882 aa29.62■■■□□ 2.33
CPNE1-203ENST00000397442 GPIHBP1Q8IV16 184 aa29.62■■■□□ 2.33
CPNE1-203ENST00000397442 PPM1KQ8N3J5 372 aa29.62■■■□□ 2.33
CPNE1-203ENST00000397442 LINC01599Q8WXQ3 324 aa29.62■■■□□ 2.33
CPNE1-203ENST00000397442 XYLT2Q9H1B5 865 aa29.62■■■□□ 2.33
CPNE1-203ENST00000397442 RNF19AQ9NV58 838 aa29.62■■■□□ 2.33
CPNE1-203ENST00000397442 SMIM28A0A1B0GU29 152 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 ARHGAP6O43182 974 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 NRDCO43847 1150 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 PNMA6AP0CW24 399 aaPredicted RBP29.61■■■□□ 2.33
CPNE1-203ENST00000397442 KCNE1P15382 129 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 GUCY2FP51841 1108 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 WDR44Q5JSH3 913 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 GLRA4Q5JXX5 417 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 HGSNATQ68CP4 663 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 NECAB2Q7Z6G3 386 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 RGS18Q9NS28 235 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 ZNHIT6Q9NWK9 470 aaKnown RBP29.61■■■□□ 2.33
CPNE1-203ENST00000397442 SCN5AQ14524 2016 aa29.61■■■□□ 2.33
CPNE1-203ENST00000397442 ITGA4P13612 1032 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 NOP14P78316 857 aaKnown RBP29.6■■■□□ 2.33
CPNE1-203ENST00000397442 GCNT1Q02742 428 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 MTF1Q14872 753 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 ARHGAP44Q17R89 818 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 PLEKHG4Q58EX7 1191 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 RAD9BQ6WBX8 426 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 AGMOQ6ZNB7 445 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 KIAA1524Q8TCG1 905 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 LPPQ93052 612 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 C1orf112Q9NSG2 853 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 DPP3Q9NY33 737 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 ARHGAP20Q9P2F6 1191 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 NUB1Q9Y5A7 615 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 ITGB3P05106 788 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 TRPC3Q13507 836 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 IRF2BP2Q7Z5L9 587 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 TET1Q8NFU7 2136 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 TSPAN18Q96SJ8 248 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 PPP1R12CQ9BZL4 782 aa29.6■■■□□ 2.33
CPNE1-203ENST00000397442 PTGESO14684 152 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 PLEKP08567 350 aaPredicted RBP29.59■■■□□ 2.33
CPNE1-203ENST00000397442 SOX5P35711 763 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 MFAP3P55082 362 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 SGSM1Q2NKQ1 1148 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 HACE1Q8IYU2 909 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 GSTCDQ8NEC7 633 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 C18orf25Q96B23 403 aaPredicted RBP29.59■■■□□ 2.33
CPNE1-203ENST00000397442 SCLYQ96I15 445 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 ZFP42Q96MM3 310 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 TUBGCP4Q9UGJ1 667 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 ITGA11Q9UKX5 1188 aa29.59■■■□□ 2.33
CPNE1-203ENST00000397442 C9IYK1 514 aa29.58■■■□□ 2.33
CPNE1-203ENST00000397442 FOXN3O00409 490 aaPredicted RBP29.58■■■□□ 2.33
CPNE1-203ENST00000397442 CYP2C18P33260 490 aa29.58■■■□□ 2.33
CPNE1-203ENST00000397442 STAT1P42224 750 aa29.58■■■□□ 2.33
CPNE1-203ENST00000397442 KCNJ6P48051 423 aa29.58■■■□□ 2.33
CPNE1-203ENST00000397442 ZNF598Q86UK7 904 aaKnown RBP29.58■■■□□ 2.33
CPNE1-203ENST00000397442 DBF4BQ8NFT6 615 aa29.58■■■□□ 2.33
CPNE1-203ENST00000397442 SHC3Q92529 594 aa29.58■■■□□ 2.33
CPNE1-203ENST00000397442 ARID3AQ99856 593 aa29.58■■■□□ 2.33
CPNE1-203ENST00000397442 MKI67P46013 3256 aaKnown RBP29.58■■■□□ 2.33
CPNE1-203ENST00000397442 KRT19P08727 400 aa29.57■■■□□ 2.32
CPNE1-203ENST00000397442 CLTBP09497 229 aa29.57■■■□□ 2.32
CPNE1-203ENST00000397442 CCL23P55773 120 aa29.57■■■□□ 2.32
CPNE1-203ENST00000397442 UBE2Q1Q7Z7E8 422 aa29.57■■■□□ 2.32
CPNE1-203ENST00000397442 ECHDC2Q86YB7 292 aa29.57■■■□□ 2.32
CPNE1-203ENST00000397442 FTHL17Q9BXU8 183 aa29.57■■■□□ 2.32
CPNE1-203ENST00000397442 IMPG2Q9BZV3 1241 aa29.57■■■□□ 2.32
CPNE1-203ENST00000397442 TSPYL2Q9H2G4 693 aaPredicted RBP29.57■■■□□ 2.32
CPNE1-203ENST00000397442 GIT1Q9Y2X7 761 aa29.57■■■□□ 2.32
CPNE1-203ENST00000397442 SKIP12755 728 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 POLR2BP30876 1174 aaKnown RBP29.56■■■□□ 2.32
CPNE1-203ENST00000397442 AFF1P51825 1210 aaKnown RBP29.56■■■□□ 2.32
CPNE1-203ENST00000397442 ARID5AQ03989 594 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 ASIC2Q16515 512 aa29.56■■■□□ 2.32
CPNE1-203ENST00000397442 TCTN1Q2MV58 587 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms