RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 LAMTOR5O43504 91 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 KINO60870 393 aaKnown RBP13.09□□□□□ -0.31
SYNE4-203ENST00000397428 LILRB5O75023 590 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 SEC24AO95486 1093 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 PROZP22891 400 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
SYNE4-203ENST00000397428 PEX3P56589 373 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 ROR1Q01973 937 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 PUM1Q14671 1186 aaKnown RBP eCLIP13.09□□□□□ -0.31
SYNE4-203ENST00000397428 TTC38Q5R3I4 469 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
SYNE4-203ENST00000397428 TPGS2Q68CL5 300 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 HAUS3Q68CZ6 603 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 DAW1Q8N136 415 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 CEP120Q8N960 986 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 IGSF22Q8N9C0 903 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 ING5Q8WYH8 240 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 C8orf76Q96K31 380 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 CCDC94Q9BW85 323 aaPredicted RBP13.09□□□□□ -0.31
SYNE4-203ENST00000397428 TOPORSQ9NS56 1045 aaPredicted RBP13.09□□□□□ -0.31
SYNE4-203ENST00000397428 DDX19AQ9NUU7 478 aaKnown RBP13.09□□□□□ -0.31
SYNE4-203ENST00000397428 ARHGAP28Q9P2N2 729 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 MAFFQ9ULX9 164 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
SYNE4-203ENST00000397428 PCDHGA2Q9Y5H1 932 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 STK24Q9Y6E0 443 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 MIA3Q5JRA6 1907 aa13.09□□□□□ -0.31
SYNE4-203ENST00000397428 CACNA1AO00555 2505 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 WDR27A2RRH5 827 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 CCDC169A6NNP5 214 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 ZNF197O14709 1029 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 SYN3O14994 580 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 NCAM2O15394 837 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 MEFVO15553 781 aaPredicted RBP13.08□□□□□ -0.32
SYNE4-203ENST00000397428 MCF2P10911 925 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 FCARP24071 287 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 ELF1P32519 619 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 YARSP54577 528 aaKnown RBP13.08□□□□□ -0.32
SYNE4-203ENST00000397428 CSTF1Q05048 431 aaKnown RBP13.08□□□□□ -0.32
SYNE4-203ENST00000397428 ADCY1Q08828 1119 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 ZNF852Q6ZMS4 543 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 C1orf186Q6ZWK4 172 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 DGLUCYQ7Z3D6 616 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 ACAP3Q96P50 834 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.32
SYNE4-203ENST00000397428 MRPL4Q9BYD3 311 aaKnown RBP13.08□□□□□ -0.32
SYNE4-203ENST00000397428 C17orf75Q9HAS0 396 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 TRPV5Q9NQA5 729 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 ZSCAN32Q9NX65 697 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 FBXL5Q9UKA1 691 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 DNM3Q9UQ16 869 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 PATJQ8NI35 1801 aa13.08□□□□□ -0.32
SYNE4-203ENST00000397428 EP300Q09472 2414 aaPredicted RBP13.07□□□□□ -0.32
SYNE4-203ENST00000397428 MED19A0JLT2 244 aaPredicted RBP13.07□□□□□ -0.32
SYNE4-203ENST00000397428 E9PMD0 336 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 H7C4K7 107 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 PODXLO00592 558 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 NRG2O14511 850 aaPredicted RBP13.07□□□□□ -0.32
SYNE4-203ENST00000397428 PRRG1O14668 218 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 SPTLC1O15269 473 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 SEC24BO95487 1268 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 LRG1P02750 347 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 CEBPBP17676 345 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 U2AF2P26368 475 aaKnown RBP eCLIP13.07□□□□□ -0.32
SYNE4-203ENST00000397428 TARSP26639 723 aaKnown RBP13.07□□□□□ -0.32
SYNE4-203ENST00000397428 OSTNP61366 133 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 MAPK7Q13164 816 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 PTGDRQ13258 359 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 IL17AQ16552 155 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 SLC10A6Q3KNW5 377 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 FAM78AQ5JUQ0 283 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 RINT1Q6NUQ1 792 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 TPRG1Q6ZUI0 275 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 MAP4K3Q8IVH8 894 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 ATRIPQ8WXE1 791 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 DNASE1L2Q92874 299 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 C18orf25Q96B23 403 aaPredicted RBP13.07□□□□□ -0.32
SYNE4-203ENST00000397428 TCEAL4Q96EI5 215 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 SUSD3Q96L08 255 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 CORO1BQ9BR76 489 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 ZFP14Q9HCL3 533 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 HEBP1Q9NRV9 189 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 CNTN3Q9P232 1028 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 MRPS17Q9Y2R5 130 aaKnown RBP13.07□□□□□ -0.32
SYNE4-203ENST00000397428 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
SYNE4-203ENST00000397428 EIF5BO60841 1220 aaKnown RBP13.06□□□□□ -0.32
SYNE4-203ENST00000397428 HIP1RO75146 1068 aa13.06□□□□□ -0.32
SYNE4-203ENST00000397428 MOSPD3O75425 235 aa13.06□□□□□ -0.32
SYNE4-203ENST00000397428 CCR2P41597 374 aa13.06□□□□□ -0.32
SYNE4-203ENST00000397428 EPHA5P54756 1037 aa13.06□□□□□ -0.32
SYNE4-203ENST00000397428 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
SYNE4-203ENST00000397428 MPZL3Q6UWV2 235 aa13.06□□□□□ -0.32
SYNE4-203ENST00000397428 CCDC83Q8IWF9 413 aa13.06□□□□□ -0.32
SYNE4-203ENST00000397428 GPR161Q8N6U8 529 aaKnown RBP13.06□□□□□ -0.32
SYNE4-203ENST00000397428 ZBTB45Q96K62 511 aaPredicted RBP13.06□□□□□ -0.32
SYNE4-203ENST00000397428 ASB16Q96NS5 453 aa13.06□□□□□ -0.32
SYNE4-203ENST00000397428 TCHPQ9BT92 498 aa13.06□□□□□ -0.32
SYNE4-203ENST00000397428 MMTAG2Q9BU76 263 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms