RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 TPM2P07951 284 aa25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 GTF2H1P32780 548 aa25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 SOX4Q06945 474 aaPredicted RBP25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 BTG3Q14201 252 aaPredicted RBP25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 NAB2Q15742 525 aa25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 LRIT3Q3SXY7 679 aa25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 ZNF280BQ86YH2 543 aa25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 TMEM130Q8N3G9 435 aa25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 VPS16Q9H269 839 aa25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 DPP3Q9NY33 737 aa25.51■■□□□ 1.67
TSPAN4-203ENST00000397397 PES1O00541 588 aaKnown RBP25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 DDHD2O94830 711 aa25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 SLC34A2O95436 690 aa25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 CYP3A5P20815 502 aa25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 COPB1P53618 953 aaKnown RBP25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 TUSC3Q13454 348 aa25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 BIRC3Q13489 604 aa25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 VWA3BQ502W6 1294 aa25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 GOLGA2P5Q9HBQ8 144 aa25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 TMEM8AQ9HCN3 771 aa25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.5■■□□□ 1.67
TSPAN4-203ENST00000397397 LAMA3Q16787 3333 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 GRXCR1A8MXD5 290 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 PHACTR2O75167 634 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 C4BPAP04003 597 aaKnown RBP25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 FMO5P49326 533 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 MXI1P50539 228 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 RABGGTBP53611 331 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 FAM109BQ6ICB4 259 aaPredicted RBP25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 SV2AQ7L0J3 742 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 TRAPPC11Q7Z392 1133 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 NRDE2Q9H7Z3 1164 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 HCSTQ9UBK5 93 aa25.49■■□□□ 1.67
TSPAN4-203ENST00000397397 CASTOR2A6NHX0 329 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 SERPINC1P01008 464 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 DSC1Q08554 894 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 ZACNQ401N2 412 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 CBWD6Q4V339 395 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 CBWD3Q5JTY5 395 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 MIIPQ5JXC2 388 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 CBWD5Q5RIA9 395 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 TDRD10Q5VZ19 366 aaKnown RBP25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 KRT39Q6A163 491 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 C1orf127Q8N9H9 656 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 NDST4Q9H3R1 872 aa25.48■■□□□ 1.67
TSPAN4-203ENST00000397397 LRRC10BA6NIK2 292 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 B4GALT3O60512 393 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 N4BP1O75113 896 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 ITGB3P05106 788 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 FANCCQ00597 558 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 MYL7Q01449 175 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 SPOUT1Q5T280 376 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 C15orf39Q6ZRI6 1047 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 APTXQ7Z2E3 356 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 COLGALT2Q8IYK4 626 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 FIBCD1Q8N539 461 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 CACNG4Q9UBN1 327 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 DNAJB4Q9UDY4 337 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 ITGA11Q9UKX5 1188 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 MRPL42Q9Y6G3 142 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 GBF1Q92538 1859 aa25.47■■□□□ 1.67
TSPAN4-203ENST00000397397 ZC3H11AO75152 810 aaKnown RBP eCLIP25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 KRT19P08727 400 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 LRPAP1P30533 357 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 UROC1Q96N76 676 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 CWH43Q9H720 699 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 R3HCC1Q9Y3T6 440 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 POLR2BP30876 1174 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 RPL9P32969 192 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 OR1G1P47890 313 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 RBP5P82980 135 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 TRPC3Q13507 836 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 FILIP1LQ4L180 1135 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 C9orf57Q5W0N0 161 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 SP7Q8TDD2 431 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 DDX27Q96GQ7 796 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 SIX4Q9UIU6 781 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 AGAP1Q9UPQ3 857 aa25.46■■□□□ 1.67
TSPAN4-203ENST00000397397 LCHNA4D1U4 455 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 PODXLO00592 558 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 VNN1O95497 513 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 PIK3CAP42336 1068 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 CLCNKBP51801 687 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 NCOA4Q13772 614 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 SCARA3Q6AZY7 606 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 RABGGTAQ92696 567 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 PAAF1Q9BRP4 392 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 TMEM175Q9BSA9 504 aa25.45■■□□□ 1.66
TSPAN4-203ENST00000397397 SZT2Q5T011 3432 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 ANO9A1A5B4 782 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 LGALS16A8MUM7 142 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 PPEF2O14830 753 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 PMM2O15305 246 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 P4HA2O15460 535 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 CST3P01034 146 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 HLA-DRAP01903 254 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 MYOGP15173 224 aa25.44■■□□□ 1.66
TSPAN4-203ENST00000397397 BCAR1P56945 870 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms