RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 T-ENOLP0DO92 83 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 SP100P23497 879 aaPredicted RBP25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 ALDH3A1P30838 453 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 CIITAP33076 1130 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 RFC5P40937 340 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 PRELPP51888 382 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 MUM1Q2TAK8 710 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 HP1BP3Q5SSJ5 553 aaPredicted RBP25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 PPP1R15BQ5SWA1 713 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 RHBDF2Q6PJF5 856 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 STARD13Q9Y3M8 1113 aa25.53■■□□□ 1.68
CSNK1E-203ENST00000396832 CYP3A4P08684 503 aa25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 DNAJC3Q13217 504 aa25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 WASHC2DQ5SRD0 308 aa25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 DENND2DQ9H6A0 471 aaPredicted RBP25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 GPRC5CQ9NQ84 441 aa25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 TOPORSQ9NS56 1045 aaPredicted RBP25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 ADGRA3Q8IWK6 1321 aa25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 WDR4P57081 412 aaKnown RBP25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 RNF220Q5VTB9 566 aa25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 RBBP8NLQ8NC74 664 aaPredicted RBP25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 PHTF1Q9UMS5 762 aa25.52■■□□□ 1.68
CSNK1E-203ENST00000396832 ITIH2P19823 946 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 CAPN12Q6ZSI9 719 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 MRRFQ96E11 262 aaKnown RBP25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 KREMEN1Q96MU8 473 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 KIFC3Q9BVG8 833 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 LRRC19Q9H756 370 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 SLC26A4O43511 780 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 CBX6O95503 412 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 SPOCK2Q92563 424 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 CD101Q93033 1021 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 WDR35Q9P2L0 1181 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 PI4KBQ9UBF8 816 aa25.51■■□□□ 1.67
CSNK1E-203ENST00000396832 TCEA3O75764 348 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 APBB1IPQ7Z5R6 666 aaPredicted RBP25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 C12orf50Q8NA57 414 aaPredicted RBP25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 MKL1Q969V6 931 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 GJD4Q96KN9 370 aaPredicted RBP25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 C9orf72Q96LT7 481 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 TUFT1Q9NNX1 390 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 NINJ2Q9NZG7 142 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 LGALS13Q9UHV8 139 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 MXI1P50539 228 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 ITGA8P53708 1063 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 C1orf220Q5T0J3 134 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 PADI6Q6TGC4 694 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 STXBP4Q6ZWJ1 553 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 UCMAQ8WVF2 138 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 SEMA4DQ92854 862 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 SLCO1B3Q9NPD5 702 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 GREB1LQ9C091 1923 aaPredicted RBP25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 CDH16O75309 829 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 POTEJP0CG39 1038 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 FMO1Q01740 532 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 MTHFD1LQ6UB35 978 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 ZFAND2BQ8WV99 257 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 TMEM117Q9H0C3 514 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 VCXQ9H320 206 aa25.5■■□□□ 1.67
CSNK1E-203ENST00000396832 FAM47DPA6NHR8 397 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 RASA4BC9J798 803 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 IRF6O14896 467 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 RASA4O43374 803 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 RASSF2P50749 326 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 SESN3P58005 492 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 MOGSQ13724 837 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 TMEM63BQ5T3F8 832 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 CBWD2Q8IUF1 395 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 ANKRD35Q8N283 1001 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 ACER1Q8TDN7 264 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 SNF8Q96H20 258 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 NACC1Q96RE7 527 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 TDRD3Q9H7E2 651 aaKnown RBP25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 NOCTQ9UK39 431 aaKnown RBP25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 USP20Q9Y2K6 914 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 DCTN3O75935 186 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 ADRB2P07550 413 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 CETN1Q12798 172 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 RASA3Q14644 834 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 SLC5A9Q2M3M2 681 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 RBM26Q5T8P6 1007 aaKnown RBP25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 SEPT12Q8IYM1 358 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 FAM136AQ96C01 138 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 PI4K2AQ9BTU6 479 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 DCLRE1BQ9H816 532 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 HSPBP1Q9NZL4 362 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 ANAPC7Q9UJX3 599 aa25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 R3HDM2Q9Y2K5 976 aaKnown RBP25.49■■□□□ 1.67
CSNK1E-203ENST00000396832 NVLO15381 856 aaKnown RBP25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 SLC15A2Q16348 729 aa25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 CYP4F22Q6NT55 531 aa25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 TMEM179Q6ZVK1 233 aa25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 NMRK1Q9NWW6 199 aa25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 SLC16A4O15374 487 aa25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 SPAG7O75391 227 aa25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 TCEAL1Q15170 157 aa25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 FBXO41Q8TF61 875 aa25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 ZNF333Q96JL9 665 aa25.48■■□□□ 1.67
CSNK1E-203ENST00000396832 SIPA1L1O43166 1804 aa25.47■■□□□ 1.67
CSNK1E-203ENST00000396832 MAGEB2O15479 319 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms