RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 FBXO22Q8NEZ5 403 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 PLEKHO2Q8TD55 490 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 C18orf25Q96B23 403 aaPredicted RBP17.77■□□□□ 0.44
AP1S3-202ENST00000396653 CCDC127Q96BQ5 260 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 LRCH3Q96II8 777 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 BPIFA3Q9BQP9 254 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 COLEC11Q9BWP8 271 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 SRRTQ9BXP5 876 aaKnown RBP17.77■□□□□ 0.44
AP1S3-202ENST00000396653 DNAJC25Q9H1X3 360 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 SPG21Q9NZD8 308 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 STK39Q9UEW8 545 aa17.77■□□□□ 0.44
AP1S3-202ENST00000396653 ATG2AQ2TAZ0 1938 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 PTPRJQ12913 1337 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 SCN1AP35498 2009 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 LRRIQ3A6PVS8 624 aaPredicted RBP17.76■□□□□ 0.43
AP1S3-202ENST00000396653 PODXLO00592 558 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 IKBKBO14920 756 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 TNNC2P02585 160 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 DLATP10515 647 aaKnown RBP17.76■□□□□ 0.43
AP1S3-202ENST00000396653 TNNI1P19237 187 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 PAX3P23760 479 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 TFAMQ00059 246 aaKnown RBP17.76■□□□□ 0.43
AP1S3-202ENST00000396653 UBE3AQ05086 875 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 UPP1Q16831 310 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 TPD52L1Q16890 204 aaPredicted RBP17.76■□□□□ 0.43
AP1S3-202ENST00000396653 DUOXA2Q1HG44 320 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 ANO6Q4KMQ2 910 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 DCLRE1AQ6PJP8 1040 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 SPRED2Q7Z698 418 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 TMEM169Q96HH4 297 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 IGSF21Q96ID5 467 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 MTMR12Q9C0I1 747 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 THAP9Q9H5L6 903 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 GOLGA2P5Q9HBQ8 144 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 MARCH5Q9NX47 278 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 DPP3Q9NY33 737 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 ARMCX3Q9UH62 379 aaPredicted RBP17.76■□□□□ 0.43
AP1S3-202ENST00000396653 ITGA11Q9UKX5 1188 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
AP1S3-202ENST00000396653 LAMA3Q16787 3333 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 ANO9A1A5B4 782 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 H3BNC9 293 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 FGF18O76093 207 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 CAVIN2O95810 425 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 PBX3P40426 434 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 CLCNKBP51801 687 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 CCDC40Q4G0X9 1142 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 FAM114A1Q8IWE2 563 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 KLHL23Q8NBE8 558 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 EEF2KMTQ96G04 330 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 PAAF1Q9BRP4 392 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 LMAN2LQ9H0V9 348 aa17.75■□□□□ 0.43
AP1S3-202ENST00000396653 TTYH1Q9H313 450 aaPredicted RBP17.75■□□□□ 0.43
AP1S3-202ENST00000396653 PRG3Q9Y2Y8 225 aaPredicted RBP17.75■□□□□ 0.43
AP1S3-202ENST00000396653 VWA8A3KMH1 1905 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 NT5C1B-RDH14C9J2C7 533 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 PIRO00625 290 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 STX10O60499 249 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 KIF4AO95239 1232 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 GTF2H1P32780 548 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 GUCY2FP51841 1108 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 MYL5Q02045 173 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 C9orf57Q5W0N0 161 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 LMBRD2Q68DH5 695 aaPredicted RBP17.74■□□□□ 0.43
AP1S3-202ENST00000396653 TMEM173Q86WV6 379 aaPredicted RBP17.74■□□□□ 0.43
AP1S3-202ENST00000396653 C1orf127Q8N9H9 656 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 OR5B17Q8NGF7 314 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 ARNTL2Q8WYA1 636 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 ZNF560Q96MR9 790 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 ADAM28Q9UKQ2 775 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 MTUS1Q9ULD2 1270 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 MYO9BQ13459 2157 aa17.74■□□□□ 0.43
AP1S3-202ENST00000396653 SF3B1O75533 1304 aaKnown RBP eCLIP17.73■□□□□ 0.43
AP1S3-202ENST00000396653 TSC2P49815 1807 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 B3GAT3O94766 335 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 EFEMP2O95967 443 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 C4BPAP04003 597 aaKnown RBP17.73■□□□□ 0.43
AP1S3-202ENST00000396653 ITGB1P05556 798 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 PNPLA4P41247 253 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 FXR1P51114 621 aaKnown RBP eCLIP17.73■□□□□ 0.43
AP1S3-202ENST00000396653 DLG4P78352 724 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 KRT17Q04695 432 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 ELAVL2Q12926 359 aaKnown RBP17.73■□□□□ 0.43
AP1S3-202ENST00000396653 GPM6BQ13491 265 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 ZACNQ401N2 412 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 C1orf220Q5T0J3 134 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 FUT10Q6P4F1 479 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 TRAPPC11Q7Z392 1133 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 DDX53Q86TM3 631 aaKnown RBP17.73■□□□□ 0.43
AP1S3-202ENST00000396653 TRIM59Q8IWR1 403 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 RNF168Q8IYW5 571 aaPredicted RBP17.73■□□□□ 0.43
AP1S3-202ENST00000396653 LRRC52Q8N7C0 313 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 CXorf38Q8TB03 319 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 BCL7CQ8WUZ0 217 aaPredicted RBP17.73■□□□□ 0.43
AP1S3-202ENST00000396653 ZNF516Q92618 1163 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 CNOT6LQ96LI5 555 aaKnown RBP17.73■□□□□ 0.43
AP1S3-202ENST00000396653 POP1Q99575 1024 aaKnown RBP17.73■□□□□ 0.43
AP1S3-202ENST00000396653 CACNG4Q9UBN1 327 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 NFE2L3Q9Y4A8 694 aa17.73■□□□□ 0.43
AP1S3-202ENST00000396653 TADA2AO75478 443 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms