RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 C1orf220Q5T0J3 134 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 IRF2BP1Q8IU81 584 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 COLGALT2Q8IYK4 626 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 C3orf58Q8NDZ4 430 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 ZNF516Q92618 1163 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 FAM193BQ96PV7 902 aaPredicted RBP18.65■□□□□ 0.58
HLA-A-204ENST00000396634 MRPL9Q9BYD2 267 aaKnown RBP18.65■□□□□ 0.58
HLA-A-204ENST00000396634 KIAA1586Q9HCI6 787 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 RNF216Q9NWF9 866 aaPredicted RBP18.65■□□□□ 0.58
HLA-A-204ENST00000396634 NFE2L3Q9Y4A8 694 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 TPM3P06753 285 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 EPB41P11171 864 aaKnown RBP18.65■□□□□ 0.58
HLA-A-204ENST00000396634 TNNI1P19237 187 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 ERCC5P28715 1186 aaPredicted RBP18.65■□□□□ 0.58
HLA-A-204ENST00000396634 BCAR1P56945 870 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 DSC1Q08554 894 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 PSMD6Q15008 389 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 LRIT3Q3SXY7 679 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 CCDC40Q4G0X9 1142 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 DCAF17Q5H9S7 520 aaPredicted RBP18.65■□□□□ 0.58
HLA-A-204ENST00000396634 FAM43BQ6ZT52 329 aaPredicted RBP18.65■□□□□ 0.58
HLA-A-204ENST00000396634 PARD3BQ8TEW8 1205 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 TIFAQ96CG3 184 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 BORCS6Q96GS4 357 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 FAM161BQ96MY7 647 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 PLEKHA5Q9HAU0 1116 aa18.65■□□□□ 0.58
HLA-A-204ENST00000396634 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.65■□□□□ 0.58
HLA-A-204ENST00000396634 COL4A4P53420 1690 aaPredicted RBP18.64■□□□□ 0.58
HLA-A-204ENST00000396634 A0A1W2PPC1 479 aa18.64■□□□□ 0.57
HLA-A-204ENST00000396634 EPOPA6NHQ4 379 aa18.64■□□□□ 0.57
HLA-A-204ENST00000396634 IL18RAPO95256 599 aa18.64■□□□□ 0.57
HLA-A-204ENST00000396634 CTNNB1P35222 781 aa18.64■□□□□ 0.57
HLA-A-204ENST00000396634 SMAD3P84022 425 aaKnown RBP18.64■□□□□ 0.57
HLA-A-204ENST00000396634 RAB30Q15771 203 aa18.64■□□□□ 0.57
HLA-A-204ENST00000396634 ZBTB6Q15916 424 aa18.64■□□□□ 0.57
HLA-A-204ENST00000396634 COLGALT1Q8NBJ5 622 aa18.64■□□□□ 0.57
HLA-A-204ENST00000396634 FNBP1Q96RU3 617 aa18.64■□□□□ 0.57
HLA-A-204ENST00000396634 SLC28A3Q9HAS3 691 aa18.64■□□□□ 0.57
HLA-A-204ENST00000396634 I3L4J1 428 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 RFXAPO00287 272 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 ZNF165P49910 485 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 VAMP7P51809 220 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 BFSP1Q12934 665 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 TUSC3Q13454 348 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 MYBPC2Q14324 1141 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 DNTTIP2Q5QJE6 756 aaKnown RBP18.63■□□□□ 0.57
HLA-A-204ENST00000396634 TCERG1LQ5VWI1 586 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 KCNT2Q6UVM3 1135 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 DHX40Q8IX18 779 aaKnown RBP18.63■□□□□ 0.57
HLA-A-204ENST00000396634 TMEM174Q8WUU8 243 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 ARNTL2Q8WYA1 636 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 CNOT6LQ96LI5 555 aaKnown RBP18.63■□□□□ 0.57
HLA-A-204ENST00000396634 TSPY26PQ9H489 355 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 ASB7Q9H672 318 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 FANCLQ9NW38 375 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 KANSL3Q9P2N6 904 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 NRP1O14786 923 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 LRRN2O75325 713 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 KIF4AO95239 1232 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 GALTP07902 379 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 GCLMP48507 274 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 PPP3CAQ08209 521 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 NCAPHQ15003 741 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 SPATA1Q5VX52 437 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 LUZP1Q86V48 1076 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 C1orf127Q8N9H9 656 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 CLP1Q92989 425 aaKnown RBP18.63■□□□□ 0.57
HLA-A-204ENST00000396634 CEP63Q96MT8 703 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 CGRRF1Q99675 332 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 INTS13Q9NVM9 706 aa18.63■□□□□ 0.57
HLA-A-204ENST00000396634 ATG2AQ2TAZ0 1938 aa18.62■□□□□ 0.57
HLA-A-204ENST00000396634 ITGB3P05106 788 aa18.62■□□□□ 0.57
HLA-A-204ENST00000396634 TMEM191BP0C7N4 346 aa18.62■□□□□ 0.57
HLA-A-204ENST00000396634 EPC2Q52LR7 807 aa18.62■□□□□ 0.57
HLA-A-204ENST00000396634 B3GALT6Q96L58 329 aa18.62■□□□□ 0.57
HLA-A-204ENST00000396634 HSD3B7Q9H2F3 369 aa18.62■□□□□ 0.57
HLA-A-204ENST00000396634 CBX8Q9HC52 389 aa18.62■□□□□ 0.57
HLA-A-204ENST00000396634 ALG13Q9NP73 1137 aaKnown RBP18.62■□□□□ 0.57
HLA-A-204ENST00000396634 MARCH5Q9NX47 278 aa18.62■□□□□ 0.57
HLA-A-204ENST00000396634 DPP3Q9NY33 737 aa18.62■□□□□ 0.57
HLA-A-204ENST00000396634 ARMCX3Q9UH62 379 aaPredicted RBP18.62■□□□□ 0.57
HLA-A-204ENST00000396634 UBQLN1Q9UMX0 589 aaKnown RBP18.62■□□□□ 0.57
HLA-A-204ENST00000396634 SLC16A3O15427 465 aaKnown RBP18.61■□□□□ 0.57
HLA-A-204ENST00000396634 KRT19P08727 400 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 KRT13P13646 458 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 ALDH7A1P49419 539 aaKnown RBP18.61■□□□□ 0.57
HLA-A-204ENST00000396634 MYL5Q02045 173 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 HABP4Q5JVS0 413 aaKnown RBP18.61■□□□□ 0.57
HLA-A-204ENST00000396634 INTS8Q75QN2 995 aaKnown RBP18.61■□□□□ 0.57
HLA-A-204ENST00000396634 FILIP1Q7Z7B0 1213 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 KLHL23Q8NBE8 558 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 ENOX1Q8TC92 643 aaKnown RBP18.61■□□□□ 0.57
HLA-A-204ENST00000396634 GDPD5Q8WTR4 605 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 ZNF558Q96NG5 402 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 TTYH1Q9H313 450 aaPredicted RBP18.61■□□□□ 0.57
HLA-A-204ENST00000396634 SPTLC3Q9NUV7 552 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 SIX4Q9UIU6 781 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 C2CD2Q9Y426 696 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 VWA8A3KMH1 1905 aa18.61■□□□□ 0.57
HLA-A-204ENST00000396634 PRUNE2Q8WUY3 3088 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms