RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 NEK8Q86SG6 692 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 MFSD6LQ8IWD5 586 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 TPH2Q8IWU9 490 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 TCEAL8Q8IYN2 117 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 SMARCD2Q92925 531 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 LOXL4Q96JB6 756 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 ZSWIM3Q96MP5 696 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 JAKMIP1Q96N16 626 aaKnown RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 POLR3FQ9H1D9 316 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 PDZD7Q9H5P4 517 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 SH2B1Q9NRF2 756 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 KIF26AQ9ULI4 1882 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-202ENST00000396629 EML5Q05BV3 1969 aa9.32□□□□□ -0.92
SCFD1-202ENST00000396629 TTLL13PA6NNM8 815 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 NCANO14594 1321 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 ZNF263O14978 683 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 ATF2P15336 505 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 SF3A2Q15428 464 aaKnown RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 WDR44Q5JSH3 913 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 C1orf228Q6PIY5 440 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 UROC1Q96N76 676 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 PPP1R10Q96QC0 940 aaKnown RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 NAP1L4Q99733 375 aaKnown RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 HSD17B14Q9BPX1 270 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 EIF2AK1Q9BQI3 630 aaKnown RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 DAXXQ9UER7 740 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 SNX14Q9Y5W7 946 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 TRAPPC3O43617 180 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 CCNT1O60563 726 aaKnown RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 B3GAT3O94766 335 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 SEC24AO95486 1093 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 ELF1P32519 619 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 VIPR2P41587 438 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 RARRES1P49788 294 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 CLCNKBP51801 687 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 UPP1Q16831 310 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 BMP2KLQ5H9B9 411 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 STPG1Q5TH74 334 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 HEATR6Q6AI08 1181 aaKnown RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 PDZD4Q76G19 769 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 CEP68Q76N32 757 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 SLFN12Q8IYM2 578 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 E2F7Q96AV8 911 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 AIFM3Q96NN9 605 aa9.31□□□□□ -0.92
SCFD1-202ENST00000396629 LSM14BQ9BX40 385 aaKnown RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 C8orf33Q9H7E9 229 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 RBM12Q9NTZ6 932 aaKnown RBP9.31□□□□□ -0.92
SCFD1-202ENST00000396629 NUP210Q8TEM1 1887 aaPredicted RBP9.3□□□□□ -0.92
SCFD1-202ENST00000396629 CCDC194A0A1B0GVG4 234 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 LRRIQ4A6NIV6 560 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 PRRG1O14668 218 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 AXIN1O15169 862 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 MARCH6O60337 910 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 EPN2O95208 641 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 KCNK5O95279 499 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 BAG4O95429 457 aaKnown RBP9.3□□□□□ -0.92
SCFD1-202ENST00000396629 XRCC6P12956 609 aaKnown RBP eCLIP9.3□□□□□ -0.92
SCFD1-202ENST00000396629 HOXB3P14651 431 aaPredicted RBP9.3□□□□□ -0.92
SCFD1-202ENST00000396629 BRCC3P46736 316 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 RAP1GAPP47736 663 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 EPHA5P54756 1037 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 MRPL58Q14197 206 aaKnown RBP9.3□□□□□ -0.92
SCFD1-202ENST00000396629 DGKKQ5KSL6 1271 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 CYP4A22Q5TCH4 519 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 NOSTRINQ8IVI9 506 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 ZBTB8OSQ8IWT0 167 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 HS6ST3Q8IZP7 471 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 C12orf50Q8NA57 414 aaPredicted RBP9.3□□□□□ -0.92
SCFD1-202ENST00000396629 C3orf58Q8NDZ4 430 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 ARRDC1-AS1Q9H2J1 176 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 RXFP3Q9NSD7 469 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 C2orf42Q9NWW7 574 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 KCNJ14Q9UNX9 436 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 INSL5Q9Y5Q6 135 aa9.3□□□□□ -0.92
SCFD1-202ENST00000396629 MYBPHLA2RUH7 354 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 HEPACAM2A8MVW5 462 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 I3L4J1 428 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 CHADO15335 359 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 HSPA4P34932 840 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 PRPF4BQ13523 1007 aaKnown RBP9.29□□□□□ -0.92
SCFD1-202ENST00000396629 PLA2G2CQ5R387 149 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 EEF1DP3Q658K8 133 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 TPGS2Q68CL5 300 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 Q6ZS52 159 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 KDF1Q8NAX2 398 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-202ENST00000396629 LEMD2Q8NC56 503 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 ZSCAN18Q8TBC5 510 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-202ENST00000396629 CSGALNACT1Q8TDX6 532 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 ADPGKQ9BRR6 497 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 GPR88Q9GZN0 384 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 CCDC113Q9H0I3 377 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 C2orf40Q9H1Z8 148 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 CYP4F11Q9HBI6 524 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 GPRC5CQ9NQ84 441 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 MAFFQ9ULX9 164 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 H7C4K7 107 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 ACKR2O00590 384 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 USO1O60763 962 aaKnown RBP9.29□□□□□ -0.92
SCFD1-202ENST00000396629 EDN1P05305 212 aa9.29□□□□□ -0.92
SCFD1-202ENST00000396629 HOXC13P31276 330 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms