RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 LDHAP00338 332 aaKnown RBP17.7■□□□□ 0.42
TRIM39-205ENST00000396551 TCF7P36402 384 aaPredicted RBP17.7■□□□□ 0.42
TRIM39-205ENST00000396551 LLGL1Q15334 1064 aa17.7■□□□□ 0.42
TRIM39-205ENST00000396551 MON1BQ7L1V2 547 aa17.7■□□□□ 0.42
TRIM39-205ENST00000396551 NRBP2Q9NSY0 501 aa17.7■□□□□ 0.42
TRIM39-205ENST00000396551 NUB1Q9Y5A7 615 aa17.7■□□□□ 0.42
TRIM39-205ENST00000396551 GOLGA6L10A6NI86 522 aa17.7■□□□□ 0.42
TRIM39-205ENST00000396551 CLDN3O15551 220 aa17.7■□□□□ 0.42
TRIM39-205ENST00000396551 MAFO75444 373 aaPredicted RBP17.7■□□□□ 0.42
TRIM39-205ENST00000396551 ARIH2O95376 493 aa17.7■□□□□ 0.42
TRIM39-205ENST00000396551 HARSP12081 509 aaKnown RBP17.7■□□□□ 0.42
TRIM39-205ENST00000396551 SSTR3P32745 418 aaPredicted RBP17.7■□□□□ 0.42
TRIM39-205ENST00000396551 KCNJ1P48048 391 aa17.7■□□□□ 0.42
TRIM39-205ENST00000396551 PAGR1Q9BTK6 254 aa17.7■□□□□ 0.42
TRIM39-205ENST00000396551 CLTAP09496 248 aa17.69■□□□□ 0.42
TRIM39-205ENST00000396551 PCDHB4Q9Y5E5 795 aa17.69■□□□□ 0.42
TRIM39-205ENST00000396551 IRF6O14896 467 aa17.69■□□□□ 0.42
TRIM39-205ENST00000396551 DDNO94850 711 aaPredicted RBP17.69■□□□□ 0.42
TRIM39-205ENST00000396551 TNFSF9P41273 254 aa17.69■□□□□ 0.42
TRIM39-205ENST00000396551 CCT5P48643 541 aa17.69■□□□□ 0.42
TRIM39-205ENST00000396551 BPIFB4P59827 614 aa17.69■□□□□ 0.42
TRIM39-205ENST00000396551 NEDD9Q14511 834 aa17.69■□□□□ 0.42
TRIM39-205ENST00000396551 C12orf50Q8NA57 414 aaPredicted RBP17.69■□□□□ 0.42
TRIM39-205ENST00000396551 FGD4Q96M96 766 aa17.69■□□□□ 0.42
TRIM39-205ENST00000396551 HERPUD2Q9BSE4 406 aa17.69■□□□□ 0.42
TRIM39-205ENST00000396551 SOCS7O14512 581 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 FSCN2O14926 492 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 FAM189A1O60320 539 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 SPDYCQ5MJ68 293 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 DAB2IPQ5VWQ8 1189 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 FAM160B1Q5W0V3 765 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 TMEM270Q6UE05 265 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 PASD1Q8IV76 773 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 PRPF31Q8WWY3 499 aaKnown RBP17.68■□□□□ 0.42
TRIM39-205ENST00000396551 SEPT1Q8WYJ6 367 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 MTUS1Q9ULD2 1270 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 CSADQ9Y600 493 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 A6NNZ2 444 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 PODXLO00592 558 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 HPDP32754 393 aaPredicted RBP17.68■□□□□ 0.42
TRIM39-205ENST00000396551 LSP1P33241 339 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 NOMO3P69849 1222 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 NOP14P78316 857 aaKnown RBP17.68■□□□□ 0.42
TRIM39-205ENST00000396551 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
TRIM39-205ENST00000396551 TUBB8Q3ZCM7 444 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 UBAP2Q5T6F2 1119 aaKnown RBP17.68■□□□□ 0.42
TRIM39-205ENST00000396551 AGBL2Q5U5Z8 902 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 METTL7BQ6UX53 244 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.68■□□□□ 0.42
TRIM39-205ENST00000396551 ELP3Q9H9T3 547 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 CNTN6Q9UQ52 1028 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 MYBL1P10243 752 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 MDH1P40925 334 aaKnown RBP17.68■□□□□ 0.42
TRIM39-205ENST00000396551 NSFP46459 744 aaKnown RBP17.68■□□□□ 0.42
TRIM39-205ENST00000396551 RUFY4Q6ZNE9 571 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 CCDC113Q9H0I3 377 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 PTPN22Q9Y2R2 807 aa17.68■□□□□ 0.42
TRIM39-205ENST00000396551 MCM3APO60318 1980 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 A0A0G2JLL6 359 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-205ENST00000396551 MYO1CO00159 1063 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 ZEB2O60315 1214 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 MSCO60682 206 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 SHBGP04278 402 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 GNA15P30679 374 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 PRRT2Q7Z6L0 340 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-205ENST00000396551 TRIM50Q86XT4 487 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 CCDC105Q8IYK2 499 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 ABRAQ8N0Z2 381 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 RBBP8NLQ8NC74 664 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-205ENST00000396551 RNF25Q96BH1 459 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-205ENST00000396551 CLMNQ96JQ2 1002 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 C11orf70Q9BRQ4 267 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 LRRC19Q9H756 370 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 MGAMO43451 1857 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 DCDC2CA8MYV0 355 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 MARK3P27448 753 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 PMS2P54278 862 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 BRSK2Q8IWQ3 736 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 C1orf54Q8WWF1 131 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 TRIM11Q96F44 468 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 OTUD5Q96G74 571 aa17.67■□□□□ 0.42
TRIM39-205ENST00000396551 ASCC2Q9H1I8 757 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-205ENST00000396551 BCCIPQ9P287 314 aaKnown RBP eCLIP17.67■□□□□ 0.42
TRIM39-205ENST00000396551 O00370 1275 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 CST3P01034 146 aaPredicted RBP17.66■□□□□ 0.42
TRIM39-205ENST00000396551 PGK2P07205 417 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 TGFB3P10600 412 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 FNTAP49354 379 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 NCOA4Q13772 614 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 ZPBP2Q6X784 338 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 ZBTB33Q86T24 672 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 UBR7Q8N806 425 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 DDX27Q96GQ7 796 aaKnown RBP17.66■□□□□ 0.42
TRIM39-205ENST00000396551 ZBTB42B2RXF5 422 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 IRX3P78415 501 aaPredicted RBP17.66■□□□□ 0.42
TRIM39-205ENST00000396551 PTP4A2Q12974 167 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 HSDL1Q3SXM5 330 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 KRT71Q3SY84 523 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 TXNRD2Q9NNW7 524 aa17.66■□□□□ 0.42
TRIM39-205ENST00000396551 SLC12A6Q9UHW9 1150 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms