RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SLC7A14Q8TBB6 771 aa19.98■□□□□ 0.79
FXN-203ENST00000396366 LARP4BQ92615 738 aaKnown RBP19.98■□□□□ 0.79
FXN-203ENST00000396366 STAMQ92783 540 aa19.98■□□□□ 0.79
FXN-203ENST00000396366 INTS4Q96HW7 963 aaKnown RBP19.98■□□□□ 0.79
FXN-203ENST00000396366 FIZ1Q96SL8 496 aa19.98■□□□□ 0.79
FXN-203ENST00000396366 KCNH6Q9H252 994 aa19.98■□□□□ 0.79
FXN-203ENST00000396366 PARVGQ9HBI0 331 aa19.98■□□□□ 0.79
FXN-203ENST00000396366 SRPRBQ9Y5M8 271 aaKnown RBP19.98■□□□□ 0.79
FXN-203ENST00000396366 H0YCG3 227 aa19.97■□□□□ 0.79
FXN-203ENST00000396366 K7ELQ4 463 aaPredicted RBP19.97■□□□□ 0.79
FXN-203ENST00000396366 HOXD11P31277 338 aaPredicted RBP19.97■□□□□ 0.79
FXN-203ENST00000396366 RPL9P32969 192 aaKnown RBP19.97■□□□□ 0.79
FXN-203ENST00000396366 LIG4P49917 911 aa19.97■□□□□ 0.79
FXN-203ENST00000396366 ZC2HC1CQ53FD0 456 aaPredicted RBP19.97■□□□□ 0.79
FXN-203ENST00000396366 VARS2Q5ST30 1063 aaKnown RBP19.97■□□□□ 0.79
FXN-203ENST00000396366 LIN9Q5TKA1 542 aa19.97■□□□□ 0.79
FXN-203ENST00000396366 SLC39A4Q6P5W5 647 aa19.97■□□□□ 0.79
FXN-203ENST00000396366 IKZF4Q9H2S9 585 aa19.97■□□□□ 0.79
FXN-203ENST00000396366 EPS15L1Q9UBC2 864 aa19.97■□□□□ 0.79
FXN-203ENST00000396366 POLIQ9UNA4 740 aa19.97■□□□□ 0.79
FXN-203ENST00000396366 BACE2Q9Y5Z0 518 aa19.97■□□□□ 0.79
FXN-203ENST00000396366 TTC26A0AVF1 554 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 LACTBL1A8MY62 500 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 HNRNPDLO14979 420 aaKnown RBP19.96■□□□□ 0.79
FXN-203ENST00000396366 FAM189A1O60320 539 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 CLTAP09496 248 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 FSHRP23945 695 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 ANKS3Q6ZW76 656 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 DYMQ7RTS9 669 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 KCNN1Q92952 543 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 USP28Q96RU2 1077 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 PHOX2BQ99453 314 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 PANK2Q9BZ23 570 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 HCFC1R1Q9NWW0 138 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 IGSF9Q9P2J2 1179 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 NUB1Q9Y5A7 615 aa19.96■□□□□ 0.79
FXN-203ENST00000396366 TISP43B9A030 160 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 ANKRD63C9JTQ0 380 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 TBCAO75347 108 aaKnown RBP19.95■□□□□ 0.78
FXN-203ENST00000396366 PIGRP01833 764 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 HNRNPA1P09651 372 aaKnown RBP eCLIP19.95■□□□□ 0.78
FXN-203ENST00000396366 LAMP2P13473 410 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 GUCY2FP51841 1108 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 ARPP19P56211 112 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 GTF2BQ00403 316 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 TCF15Q12870 199 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 ENOX2Q16206 610 aaKnown RBP19.95■□□□□ 0.78
FXN-203ENST00000396366 ALYREFQ86V81 257 aaKnown RBP19.95■□□□□ 0.78
FXN-203ENST00000396366 SLC44A3Q8N4M1 653 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 TMEM105Q8N8V8 129 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 KIF12Q96FN5 646 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 NOTCH4Q99466 2003 aa19.95■□□□□ 0.78
FXN-203ENST00000396366 MYMKA6NI61 221 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 STX6O43752 255 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 TBC1D4O60343 1298 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 MCM4P33991 863 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 ROR1Q01973 937 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 MRPL58Q14197 206 aaKnown RBP19.94■□□□□ 0.78
FXN-203ENST00000396366 ZBTB6Q15916 424 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 MSTO1Q9BUK6 570 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 RPP25Q9BUL9 199 aaKnown RBP19.94■□□□□ 0.78
FXN-203ENST00000396366 PLEKHA5Q9HAU0 1116 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.94■□□□□ 0.78
FXN-203ENST00000396366 CCDC39Q9UFE4 941 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 DUSP12Q9UNI6 340 aa19.94■□□□□ 0.78
FXN-203ENST00000396366 A0A087X0B3 334 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 A0A0B4J269 797 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 WDR27A2RRH5 827 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 SYN3O14994 580 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 OGTO15294 1046 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 ABLIM3O94929 683 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 CFHP08603 1231 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 NPR3P17342 541 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 SLC39A14Q15043 492 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 UVSSAQ2YD98 709 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 RRAGBQ5VZM2 374 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 SLC8B1Q6J4K2 584 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 SFR1Q86XK3 245 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 KRI1Q8N9T8 703 aaKnown RBP19.93■□□□□ 0.78
FXN-203ENST00000396366 ZNF461Q8TAF7 563 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 ITFG1Q8TB96 612 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 DDX12PQ92771 950 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 FAM212AQ96EL1 285 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 SUSD3Q96L08 255 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 DNMT3BQ9UBC3 853 aaKnown RBP19.93■□□□□ 0.78
FXN-203ENST00000396366 FBXL5Q9UKA1 691 aa19.93■□□□□ 0.78
FXN-203ENST00000396366 TIMM13Q9Y5L4 95 aaPredicted RBP19.93■□□□□ 0.78
FXN-203ENST00000396366 PPEF2O14830 753 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 SEC24AO95486 1093 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 HOXA9P31269 272 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 ACOT2P49753 483 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 PPP2R3AQ06190 1150 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 CTXN3Q4LDR2 81 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 ZNF720Q7Z2F6 126 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 MAP4K3Q8IVH8 894 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 FLCNQ8NFG4 579 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 MFSD1Q9H3U5 465 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 RPF1Q9H9Y2 349 aaKnown RBP19.92■□□□□ 0.78
FXN-203ENST00000396366 TBC1D7Q9P0N9 293 aa19.92■□□□□ 0.78
FXN-203ENST00000396366 TFIP11Q9UBB9 837 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms