RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 MLKLQ8NB16 471 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 CACTINQ8WUQ7 758 aaKnown RBP20.8■□□□□ 0.92
HOXA9-202ENST00000396345 ADAM28Q9UKQ2 775 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 CTNND2Q9UQB3 1225 aa20.8■□□□□ 0.92
HOXA9-202ENST00000396345 BICDL2A1A5D9 508 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 CETN3O15182 167 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 CSPG5O95196 566 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 KIF4AO95239 1232 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 LRPAP1P30533 357 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 TFAMQ00059 246 aaKnown RBP20.79■□□□□ 0.92
HOXA9-202ENST00000396345 PAK1Q13153 545 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 CAVIN1Q6NZI2 390 aaKnown RBP20.79■□□□□ 0.92
HOXA9-202ENST00000396345 TMEM130Q8N3G9 435 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 SYAP1Q96A49 352 aaPredicted RBP20.79■□□□□ 0.92
HOXA9-202ENST00000396345 CCDC127Q96BQ5 260 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 MRPL38Q96DV4 380 aaKnown RBP20.79■□□□□ 0.92
HOXA9-202ENST00000396345 FNBP1Q96RU3 617 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 TLR9Q9NR96 1032 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 DPP3Q9NY33 737 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 LMCD1Q9NZU5 365 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 TMEM63CQ9P1W3 806 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 STK39Q9UEW8 545 aa20.79■□□□□ 0.92
HOXA9-202ENST00000396345 TMEM189-UBE2V1I3L0A0 370 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 MAPK13O15264 365 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 B3GAT3O94766 335 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 DLATP10515 647 aaKnown RBP20.78■□□□□ 0.92
HOXA9-202ENST00000396345 FOSL2P15408 326 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 POU3F3P20264 500 aaPredicted RBP20.78■□□□□ 0.92
HOXA9-202ENST00000396345 PSMC2P35998 433 aaKnown RBP20.78■□□□□ 0.92
HOXA9-202ENST00000396345 FKBP3Q00688 224 aaKnown RBP20.78■□□□□ 0.92
HOXA9-202ENST00000396345 CAMK1Q14012 370 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 KLHL40Q2TBA0 621 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 VPS52Q8N1B4 723 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 HASPINQ8TF76 798 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 VN1R3Q9BXE9 311 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 MTCH2Q9Y6C9 303 aa20.78■□□□□ 0.92
HOXA9-202ENST00000396345 COL6A3P12111 3177 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 CDH23Q9H251 3354 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 AKAP3O75969 853 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 TMEM191BP0C7N4 346 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 TNNI1P19237 187 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 STX17P56962 302 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 ERVFC1P60507 584 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 LMBRD2Q68DH5 695 aaPredicted RBP20.77■□□□□ 0.92
HOXA9-202ENST00000396345 TTI2Q6NXR4 508 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 FUT10Q6P4F1 479 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 FOXR2Q6PJQ5 311 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 TMC7Q7Z402 723 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 WDR49Q8IV35 697 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 ZC3H3Q8IXZ2 948 aaKnown RBP20.77■□□□□ 0.92
HOXA9-202ENST00000396345 FAM186BQ8IYM0 893 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 C3orf58Q8NDZ4 430 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 MICAL1Q8TDZ2 1067 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 EEF2KMTQ96G04 330 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 ANKRD36BP1Q96IX9 119 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 CGRRF1Q99675 332 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 ENTPD7Q9NQZ7 604 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 INTS13Q9NVM9 706 aa20.77■□□□□ 0.92
HOXA9-202ENST00000396345 EFEMP2O95967 443 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 TNNC2P02585 160 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 SOD2P04179 222 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 EPB41P11171 864 aaKnown RBP20.76■□□□□ 0.91
HOXA9-202ENST00000396345 IGFBP6P24592 240 aaPredicted RBP20.76■□□□□ 0.91
HOXA9-202ENST00000396345 DUOXA2Q1HG44 320 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 DPCR1Q3MIW9 517 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 C9orf57Q5W0N0 161 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 SASS6Q6UVJ0 657 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 CD300LGQ6UXG3 332 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 TAS1R1Q7RTX1 841 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 PARD3BQ8TEW8 1205 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 FAM84AQ96KN4 292 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 POP1Q99575 1024 aaKnown RBP20.76■□□□□ 0.91
HOXA9-202ENST00000396345 DUSP9Q99956 384 aaKnown RBP20.76■□□□□ 0.91
HOXA9-202ENST00000396345 TCF25Q9BQ70 676 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 MKNK1Q9BUB5 465 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 GPR62Q9BZJ7 368 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 MTMR12Q9C0I1 747 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 DACH1Q9UI36 760 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 RWDD2AQ9UIY3 292 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 SF3B1O75533 1304 aaKnown RBP eCLIP20.76■□□□□ 0.91
HOXA9-202ENST00000396345 PTPRJQ12913 1337 aa20.76■□□□□ 0.91
HOXA9-202ENST00000396345 FSCN2O14926 492 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 TRAPPC3O43617 180 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 KRT13P13646 458 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 IRS1P35568 1242 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 ELAVL2Q12926 359 aaKnown RBP20.75■□□□□ 0.91
HOXA9-202ENST00000396345 BMS1Q14692 1282 aaKnown RBP20.75■□□□□ 0.91
HOXA9-202ENST00000396345 SKOR2Q2VWA4 1001 aaPredicted RBP20.75■□□□□ 0.91
HOXA9-202ENST00000396345 PLPP4Q5VZY2 271 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 PDE12Q6L8Q7 609 aaKnown RBP20.75■□□□□ 0.91
HOXA9-202ENST00000396345 INTS8Q75QN2 995 aaKnown RBP20.75■□□□□ 0.91
HOXA9-202ENST00000396345 OR5B17Q8NGF7 314 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 PLEKHO2Q8TD55 490 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 TMC2Q8TDI7 906 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 HERC2P3Q9BVR0 1158 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 GZF1Q9H116 711 aaPredicted RBP20.75■□□□□ 0.91
HOXA9-202ENST00000396345 ZBP1Q9H171 429 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 NGRNQ9NPE2 291 aaKnown RBP20.75■□□□□ 0.91
HOXA9-202ENST00000396345 STXBP5LQ9Y2K9 1186 aa20.75■□□□□ 0.91
HOXA9-202ENST00000396345 NUB1Q9Y5A7 615 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms